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Job DescriptionP43405
Confidence100.00%DateFri May 25 09:37:32 BST 2012
Rank173Aligned Residues246
% Identity20%Templatec3rp9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase; PDBTitle: crystal structure of the apo mapk from toxoplasma gondii, 25.m01780 or2 tgme49_007820
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC. . . . . . EAESW
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Template Sequence  YEIRHLHVCEAYDKLRV. . . . . . . . . . . VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL
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   55....60.........70. ........80.........90.........100.........110.........120...
 
   445....450.........460.........470.........480.........490.........500.........510.........520....
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Query Sequence  MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN
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Template Sequence  YVVLEIADSD. FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN
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   133......140.. .......150.........160.........170.........180.........190.........200.........210.
 
   525....530.........540........ .550.........560.........570.......
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Query Sequence  YYKAQTHGKWPVKWYAPECINYYK. FSSKSDVWSFGVLMWEAFSYGQKPYRGMK. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GNSQLPVTR. . . WYRAPELILLQENYTEAIDVWSIGCIFAELLN. MIKENVAYHADRGPLFPTRGNRDQLNVIFNILGTP
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   212.......220 .........230.........240.........250.. .......260.........270.........280.......
 
   578.580.........590..... ....600.........610.........620.........630.....
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Query Sequence  . . . . . . . . . GSEVTAMLEKGERMGCPA. . . . . . GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN
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Template Sequence  SEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINEC. . . LAHPFFKEVR
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   335....340.........350.........360.........370.........380.........390.... .....400....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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