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Job DescriptionP43405
Confidence100.00%DateFri May 25 09:37:32 BST 2012
Rank30Aligned Residues241
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   376...380.........390.........400.........410.........420.........430......... 440.........450....
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Query Sequence  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC. EAESWMLVMEMAELG
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Template Sequence  VRKLGSYGEVLLCKEKNGH. . SEKAIKVIKKKF. . . . . HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGG
Template Known Secondary structure 

TTT
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T.....T


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TT
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   60.........70........ .80.........90 .........100.........110.........120.........130..
 
   455....460.........470.........480.........490.........500.. .......510.........520.........530.
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Query Sequence  PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL. . . VTQHYAKISDFGLSKALRADENYYKAQTH
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Template Sequence  ELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY. . . . KLRD
Template Known Secondary structure  BS


TT
S

SGGGSSTT

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   151........160.........170.........180.........190.........200.........210.........220.. ....
 
   532.......540.........550.........560.........570.........580.........590..... ....600........
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Query Sequence  GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA. . . GCPREMYDLMNLC
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Template Sequence  RLGTAYYIAPEVL. KKKYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLM
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S
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   227..230......... 240.........250.........260. ........270.........280.........290.........300....
 
   609610.........620.........630..
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Query Sequence  WTYDVENRPGFAAVELRLRNYYYD
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Template Sequence  LTYDYNKRCTAEEA. . . LNSRWIK
Template Known Secondary structure  T
SSTTTS

...TS
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   305....310........ .320.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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