Job Description P43405 Confidence 98.31% Date Fri May 25 09:37:32 BST 2012 Rank 380 Aligned Residues 125 % Identity 18% Template c3ovcA_ PDB info PDB header:transferase/antibiotic Chain: A: PDB Molecule:hygromycin-b 4-o-kinase; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(4)-ia Resolution 1.95 Å

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		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.			.	.	.	.	.	.	450	.
Predicted Secondary structure																																																										.	.													.	.
Query SS confidence																																																										.	.													.	.
Query Sequence		E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P	Y	.	.	I	V	R	M	I	G	I	C	E	A	E	S	.	.	W	M	L	V	M	E	M	A
Query Conservation																																																										.	.													.	.
Alig confidence																	.	.	.	.															.	.	.	.	.	.	.																	.	.													.	.
Template Conservation																	.	.	.	.															.	.	.	.	.	.	.
Template Sequence		Q	L	S	E	G	E	E	S	R	A	F	S	F	D	V	.	.	.	.	G	G	R	G	Y	V	L	R	V	N	S	C	A	D	.	.	.	.	.	.	.	G	F	Y	K	D	R	Y	V	Y	R	H	F	A	S	A	A	L	P	I	P	E	V	L	D	I	G	E	F	S	E	S	L	T	Y	C	I	S	R	R	A
Template Known Secondary structure							S	S									.	.	.	.	T	T									S				.	.	.	.	.	.	.															S	S	S											S	S	S	S
Template Predicted Secondary structure																	.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		Q	G	V	T	L	.	.	.	.	.	.	.	Q	D	L	P	E	T	E	L	P	A	V	L	Q	P	V	A	E	A	X	D	A	I	A	A	A	D	L	S	Q	T	S	G	F	G	P	F	G	P	Q	G	I	G	Q	Y	T	T	W	R	D	F	I	C	A	I	A	D	P	H	V	Y	H	W	Q	T	V	X	D	D
Template Known Secondary structure			S			T	.	.	.	.	.	.	.	T	T	S		G	G	G	S	G	G	G																	T	T		B							T	T	S	B				S	S							G	G	G		T	T	T									T
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																									488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	S	A	S	V	A	Q	A	L	D	E	L	X	L	W	A	E	D	C	P	E	V	R	H	L	V	H	A	D	F	G	S	N	N	V	L	T	D	N	G	R	I	T	A	V	I	D	W	S	E	A	X	F
Template Known Secondary structure		T	T															G	G	G										S	S		S	S	T	T					T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions