Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 227 Aligned Residues 225 % Identity 10% Template c3otvC_ PDB info PDB header:transferase Chain: C: PDB Molecule:probable conserved transmembrane protein; PDBTitle: crystal structure of the intracellular domain of rv3910 from2 mycobacterium tuberculosis Resolution 3.09 Å

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		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																																.
Query SS confidence																																								.																																.
Query Sequence		T	L	E	D	K	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	.	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	.	E	A	E	S	W	M	L	V	M
Query Conservation																																								.																																.
Alig confidence																					.	.																		.																																.
Template Conservation																					.	.
Template Sequence		Y	R	L	L	I	F	H	G	G	V	P	P	L	Q	F	W	Q	A	L	.	.	D	T	A	L	D	R	Q	V	A	L	T	F	V	D	P	Q	G	V	L	P	D	D	V	L	Q	E	T	L	S	R	T	L	R	L	S	R	I	D	K	P	G	V	A	R	V	L	D	V	V	H	T	R	A	G	G	L	V	V	A
Template Known Secondary structure												T	T								.	.		T	T	T	T										T	T			S														T	T	T	T				T	T	B										S	S	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A
Query Conservation
Alig confidence														.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	W	I	R	G	G	S	L	Q	E	V	A	.	.	D	T	S	P	S	P	V	G	A	I	R	A	M	Q	S	L	A	A	A	A	D	A	A	H	R	A	G	V	A	L	S	I	D	H	P	S	R	V	R	V	S	I	D	G	D	V	V	L	A	Y	P	A	T	M	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														.	.	T	T																								T	T							S	G	G	G					T	T	S						S					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.							.	.	.	.	600	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	P	A	.	.	.	.	.	.	G	C	P	R	E	M	Y
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																												.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	A	N	P	Q	D	D	I	R	G	I	G	A	S	L	Y	A	L	L	V	.	N	R	W	P	L	P	E	A	G	V	R	S	G	L	A	P	A	E	R	D	T	A	G	Q	P	I	E	P	A	D	I	D	R	D	I	P	F	Q	I	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																				.	S		B		S				S	S			S			B			B		T	T	S		B			S	T	T	T		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
																				173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y	Y	Y
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		A	V	A	A	R	S	V	Q	G	D	G	G	I	R	S	A	.	S	T	L	L	N	L	M	Q	Q	A	T	A
Template Known Secondary structure									S	S	S	S						.
Template Predicted Secondary structure																		.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions