Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 254 Aligned Residues 233 % Identity 19% Template c3ll6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:cyclin g-associated kinase; PDBTitle: crystal structure of the human cyclin g associated kinase (gak) Resolution 2.10 Å

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		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		Y	L	D	R	K	L	L	T	L	E	D	K	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	.	N	P	Y	I	V	R	M	I	G	I	C	E	A	E
Query Conservation																																																																			.
Alig confidence																																	.	.												.	.																				.
Template Conservation																																	.	.												.	.
Template Sequence		T	V	E	L	G	E	L	R	L	R	V	R	R	V	L	A	E	G	F	A	F	V	Y	E	A	Q	D	V	G	S	G	.	.	R	E	Y	A	L	K	R	L	L	S	N	.	.	E	E	E	K	N	R	A	I	I	Q	E	V	C	F	M	K	K	L	S	G	H	P	N	I	V	Q	F	C	S	A	A	S	I	G
Template Known Secondary structure						T	T																						T	T	T		.	.											S	.	.	S																		T	T	S	T	T	B
Template Predicted Secondary structure																																	.	.												.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		443	.	.									.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.				.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.			490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.																	.	.	.																													.	.
Query SS confidence					.	.	.	.	.	.	.	.																	.	.	.																													.	.
Query Sequence		S	W	M	.	.	.	.	.	.	.	.	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	.	.	.	Q	N	R	H	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	.	.	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K
Query Conservation					.	.	.	.	.	.	.	.																	.	.	.																													.	.
Alig confidence					.	.	.	.	.	.	.	.																	.	.	.																													.	.
Template Conservation
Template Sequence		K	E	E	S	D	T	G	Q	A	E	F	L	L	L	T	E	L	C	K	G	Q	L	V	E	F	L	K	K	M	E	S	R	G	P	L	S	C	D	T	V	L	K	I	F	Y	Q	T	C	R	A	V	Q	H	M	H	R	Q	K	P	P	I	I	H	R	D	L	K	V	E	N	L	L	L	S	N	Q	G	T	I	K
Template Known Secondary structure		G	G	G	S	T	T	S	S											S											T	T	T		S																						T	S	S	S			B						G	G	G					T	T	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																																.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																																.											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	C	D	F	G	S	A	T	T	I	S	H	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	P	E	I	I	D	Y	S	N	F	P	I	G	E	K	Q	D	I	W	A	L	G	C	I	L	Y	L	L	C	F	.	R	Q	H	P	F	E	S	I	P	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B				T	T		B			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.						S		S					S	S																		.	S	S		S						T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																																.											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.														.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	G	C	P	A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	H	D	T	Q	Y	T	V	F	H	S	L	I	R	A	M	L	Q	V	N	P	E	E	R	L	S	I	A	E	V	V	H	Q	L	Q	E	I
Template Known Secondary structure		.	.	.	.	T			S	S											S		S	S	G	G	G	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions