Return to main results Retrieve Phyre Job Id

Job DescriptionP43405
Confidence100.00%DateFri May 25 09:37:32 BST 2012
Rank165Aligned Residues238
% Identity26%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400.........410.........420.........430.........440... ......
Predicted Secondary structure 


























.
Query SS confidence 








































































.





Query Sequence  TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES. WMLVME
Query Conservation        

 
 

 
             



 
               
   
  
 




 
 
      .  

 
Alig confidence 























..













.































.





Template Conservation 
 
   

 
  
 
         ..  



 
      .        

  
  
 




             

 
Template Sequence  YNIVCMLGKGSFGEVLKCKDRITQ. . QEYAVKVINKASAK. NKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE
Template Known Secondary structure 
SS
TTT
..
B.


T


TTB


SS
Template Predicted Secondary structure 






..

.









Template SS confidence 















































































   76...80.........90......... 100.........110... ......120.........130.........140.........150..
 
   450.........460.........470.........480.........490.........500.. .......510.........520......
Predicted Secondary structure 

















...















Query SS confidence 




















































. . .























Query Sequence  MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL. . . VTQHYAKISDFGLSKALRADENYY
Query Conservation      
 
   
                

  

 


   






  



...      

 




          
Alig confidence 




















































...




















...
Template Conservation        
                     
   
  

     
      

                          ...
Template Sequence  LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT. . .
Template Known Secondary structure 


S
BSS

TT


S


GGGSSSSTT


S
S
TTTB



...
Template Predicted Secondary structure 









































...
Template SS confidence 















































































   154.....160.........170.........180.........190.........200.........210.........220.........230
 
   527..530.........540.........550.........560.........570.........580......... 590.........600...
Predicted Secondary structure 

























...








Query SS confidence 






























































. . .













Query Sequence  KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE. . . RMGCPAGCPREMYD
Query Conservation          
    


       
  




 

 
 
  
 
  
            
    ...    
   
     
Alig confidence  .........































.




















...













Template Conservation  .........              
 
 








 

  .
  

           
               
     
Template Sequence  . . . . . . . . . TAYYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD
Template Known Secondary structure  .........
GGG

GGGGGT


.SS
SS

SST




SGGGGGS
Template Predicted Secondary structure  .........













.























Template SS confidence 















































































   238.240.........250.........260......... 270.........280.........290.........300.......
 
   604.....610.........620....
Predicted Secondary structure 






Query SS confidence 




















Query Sequence  LMNLCWTYDVENRPGFAAVEL
Query Conservation 

  
    
  


   
  
Alig confidence 




















Template Conservation 

  

  

  
 
  


 
Template Sequence  LIRKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
Template Predicted Secondary structure 






Template SS confidence 




















   308.310.........320........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions