Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 44 Aligned Residues 247 % Identity 27% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.
Predicted Secondary structure																			.																																												.													.
Query SS confidence																			.																																												.													.
Query Sequence		K	L	L	T	L	E	D	K	E	L	G	S	G	N	F	G	T	.	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	.	D	N	P	Y	I	V	R	M	I	G	I	C	.	E	A	E	S	W
Query Conservation																			.																																												.													.
Alig confidence																			.							.	.	.	.															.	.	.	.	.															.													.
Template Conservation																										.	.	.	.															.	.	.	.	.
Template Sequence		K	N	L	V	V	S	E	K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	F	.	.	.	.	Q	G	R	P	V	A	V	K	R	M	L	I	D	F	.	.	.	.	.	C	D	I	A	L	M	E	I	K	L	L	T	E	S	D	D	H	P	N	V	I	R	Y	Y	C	S	E	T	T	D	R	F	L
Template Known Secondary structure			S	S				S							T	T	T								S	.	.	.	.	S	S										G	G	G	.	.	.	.	.															T	T	S	T	T	B										T	T
Template Predicted Secondary structure																										.	.	.	.															.	.	.	.	.
Template SS confidence
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.					.	.	.	.	.	700	.	.	.	.	.	.	.	.						.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470								.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	V	K	D	K	N	.	.	.	.	.	.	.	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Alig confidence										.																		.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		Y	I	A	L	E	L	C	N	.	L	N	L	Q	D	L	V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S	G	V	A	H	L	H	S	L	K	I	I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E
Template Known Secondary structure									S	.								T			S		S	T	T						S	S																				T	T							S	T	T	T											S			S	S		S
Template Predicted Secondary structure										.
Template SS confidence
		742	.	.	.	.	.	.	.		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820
					508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.				.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure		.	.	.																																								.	.	.
Query SS confidence		.	.	.																																								.	.	.
Query Sequence		.	.	.	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	.	.	.	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V
Query Conservation		.	.	.																																								.	.	.
Alig confidence		.	.	.																											.	.												.	.	.																													.	.
Template Conservation																															.	.																																											.	.
Template Sequence		N	L	R	I	L	I	S	D	F	G	L	C	K	K	L	D	S	G	Q	F	R	N	L	N	N	P	S	G	T	.	.	S	G	W	R	A	P	E	L	L	E	E	S	T	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	G	.	.	D	K	Y	S	R
Template Known Secondary structure							B				S	S					T	T	T									S	G	G	.	.	G	G	G							S	T	T	T						T																T	T	S			T	T		.	.	S
Template Predicted Secondary structure																															.	.																																											.	.
Template SS confidence
		821	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.			850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.			.	.	.	.	.
		582	.	.	.	.	.	.	.							590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		T	A	M	L	E	K	G	E	.	.	.	.	.	.	R	M	G	C	P	A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y	Y	Y
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																																		.	.	.
Template Conservation																																																	.	.	.
Template Sequence		E	S	N	I	I	R	G	I	F	S	L	D	E	M	K	C	L	H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	P	L	K	R	P	T	A	M	K	V	.	.	.	L	R	H	P	L	F
Template Known Secondary structure								T								T	T																		T		S	S	T	T	T	S							.	.	.		T	S	G	G	G
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		928	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.				.	.	.	.	.	980

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions