Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 21 Aligned Residues 258 % Identity 22% Template c3c4yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of apo form of g protein coupled receptor kinase 12 at 7.51a Resolution 7.51 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.
Predicted Secondary structure																																											.																																				.
Query SS confidence																																											.																																				.
Query Sequence		K	L	L	T	L	E	D	K	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	.	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	E	A	E	S	.	W	M
Query Conservation																																											.																																				.
Alig confidence																													.	.													.																																				.
Template Conservation																													.	.
Template Sequence		E	D	W	F	L	D	F	R	V	L	G	R	G	G	F	G	E	V	F	A	C	Q	M	K	A	T	G	.	.	K	L	Y	A	C	K	K	L	N	K	K	R	L	K	K	R	K	G	Y	Q	G	A	M	V	E	K	K	I	L	A	K	V	H	S	R	F	I	V	S	L	A	Y	A	F	E	T	K	T	D	L	C
Template Known Secondary structure		G	G	G	B									S	S	S									T	T	T	T	.	.															T	T	T													T	T				T	T	B			B							S	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460					.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	.	.	.	.	Q	Q	N	R	H	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		L	V	M	T	I	M	N	G	G	D	I	R	Y	H	I	Y	N	V	D	E	D	N	P	G	F	Q	E	P	R	A	I	F	Y	T	A	Q	I	V	S	G	L	E	H	L	H	Q	R	N	I	I	Y	R	D	L	K	P	E	N	V	L	L	D	D	D	G	N	V	R	I	S	D	L	G	L	A	V	E	L	K	A
Template Known Secondary structure									S								T	T	T	S	S	S	S		S																							T	S	B							G	G	G					S	S	S								S	S			B			S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.			.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	.	.	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	P	A	G	C	P	R
Query Conservation																																																									.	.
Alig confidence												.	.	.																																		.									.	.														.
Template Conservation												.	.	.																																		.																								.
Template Sequence		G	Q	T	K	T	K	G	Y	A	G	.	.	.	T	P	G	F	M	A	P	E	L	L	L	G	E	E	Y	D	F	S	V	D	Y	F	A	L	G	V	T	L	Y	E	M	I	A	.	A	R	G	P	F	R	A	R	G	V	E	N	K	E	L	K	Q	R	V	L	E	Q	A	.	V	T	Y	P	D	K	F	S	P
Template Known Secondary structure		S				B					S	.	.	.		T	T	T	S						T	T			B		T															T	T	.	S	S		S	S	S															T			.					S	S
Template Predicted Secondary structure												.	.	.																																		.																								.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.						.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	.	.	.	.	.	P	G	F	A	A	V	E	L	R	L	R	N	Y	Y	Y	D	V	V	N
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.							.	.	.
Template Conservation																														.	.	.
Template Sequence		A	S	K	D	F	C	E	A	L	L	Q	K	D	P	E	K	R	L	G	F	R	D	G	S	C	D	G	L	.	.	.	R	T	H	P	L	F	R	D	I	S
Template Known Secondary structure											T		S	S	S	S	S	S			S		T	T	S	T	T	T	T	.	.	.	T	T	S	T	T		S	S	S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.				.	.	.	450	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions