Job Description P43405 Confidence 99.90% Date Fri May 25 09:37:32 BST 2012 Rank 333 Aligned Residues 152 % Identity 14% Template c2yleA_ PDB info PDB header:actin-binding protein Chain: A: PDB Molecule:protein spire homolog 1; PDBTitle: crystal structure of the human spir-1 kind fsi domain in2 complex with the fsi peptide Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		452	.	.	.	.	.	.	.	460	.	.		.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.		.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																					.
Query SS confidence													.																					.
Query Sequence		E	L	G	P	L	N	K	Y	L	Q	Q	.	N	R	H	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	.	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q
Query Conservation													.																					.
Alig confidence													.																					.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	L	S	L	E	E	I	L	R	L	Y	N	Q	P	I	N	E	E	Q	A	W	A	V	C	Y	Q	C	C	G	S	L	R	A	A	A	R	R	R	Q	P	R	H	R	V	R	S	A	A	Q	I	R	V	W	R	D	G	A	V	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S												T	S																								T	T								S	G	G	G					T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.						.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	.	.	.	.	.	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	P	A	G	C	P	R	E	M	Y	D	L
Query Conservation																																																		.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	A	P	A	K	L	G	Y	S	Q	C	M	E	T	E	V	I	E	S	L	G	I	I	I	Y	K	A	L	D	.	Y	G	L	K	E	N	E	E	R	E	L	S	P	P	L	E	Q	L	I	D	H	M	A	N	T	V	E	E	K	R	K	I	S	A	I	R	S	Y	R	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						S	S	S	S	S																		T	.	T	T			T	T																	T	T						S							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
												99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y	Y	Y	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	L	C	A	A	H	L	P	T	E	S	D	A	P	N	H	Y	Q	A	V	C	R	A	L	F	A	E	T
Template Known Secondary structure							T	T	S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions