Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 91 Aligned Residues 252 % Identity 18% Template c2wtkB_ PDB info PDB header:transferase/metal-binding protein Chain: B: PDB Molecule:ste20-related kinase adapter protein alpha; PDBTitle: structure of the heterotrimeric lkb1-stradalpha-mo25alpha2 complex Resolution 2.65 Å

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		371	.	.	.	.	.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.
Predicted Secondary structure												.	.																																																																.
Query SS confidence												.	.																																																																.
Query Sequence		T	L	E	D	K	E	L	G	S	G	.	.	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	E	A	E	S	.	W	M	L	V
Query Conservation												.	.																																																																.
Alig confidence												.	.															.	.																																																.
Template Conservation																												.	.
Template Sequence		Y	E	L	L	T	V	I	G	K	G	F	E	D	L	M	T	V	N	L	A	R	Y	K	P	T	G	.	.	E	Y	V	T	V	R	R	I	N	L	E	A	C	S	N	E	M	V	T	F	L	Q	G	E	L	H	V	S	K	L	F	N	H	P	N	I	V	P	Y	R	A	T	F	I	A	D	N	E	L	W	V	V
Template Known Secondary structure												T	T	T	T									T	T	T		.	.										T	T	S	S																					T	T	B										S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.			.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	.	.	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		T	S	F	M	A	Y	G	S	A	K	D	L	I	C	T	H	F	M	D	G	M	N	E	L	A	I	A	Y	I	L	Q	G	V	L	K	A	L	D	Y	I	H	H	M	G	Y	V	H	R	S	V	K	A	S	H	I	L	I	S	V	D	G	K	V	Y	L	S	G	L	R	S	N	L	S	M	I	S	H	G	Q	R
Template Known Secondary structure						T	T										T		T	T																								T	T							S	G	G	G					T	T								G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		526	.	.	.	530	.	.	.	.					.	.	.	.	.	540	.	.	.	.	.	.	.			.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.														.	.
Query SS confidence											.	.	.	.														.	.
Query Sequence		Y	K	A	Q	T	H	G	K	W	.	.	.	.	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	.	.	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	P	A	G	C	P	R
Query Conservation											.	.	.	.														.	.
Alig confidence											.	.	.	.														.	.																					.																		.	.	.	.	.	.	.
Template Conservation																																																		.																		.	.	.	.	.	.	.
Template Sequence		Q	R	V	V	H	D	F	P	K	Y	S	V	K	V	L	P	W	L	S	P	E	V	L	Q	Q	N	L	Q	G	Y	D	A	K	S	D	I	Y	S	V	G	I	T	A	C	E	L	A	N	.	G	H	V	P	F	D	M	P	A	T	Q	M	L	L	E	K	L	.	.	.	.	.	.	.	V	P	C	L	F	S	P
Template Known Secondary structure			S		B					S	S		G	G	G	G	G	G	S						S			T	T		B		T																	.	S	S													T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.																		.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.	.
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y	Y	Y	D	V	V	N
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		H	F	H	H	F	V	E	Q	C	L	Q	R	N	P	D	A	R	P	S	A	S	T	L	.	.	.	L	N	H	S	F	F	K	Q	I	K
Template Known Secondary structure											T		S	S	G	G	G	S							.	.	.		T		G	G	G	T	T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions