Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 188 Aligned Residues 250 % Identity 22% Template c2qr8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2) Resolution 2.00 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.
Predicted Secondary structure																																																													.														.
Query SS confidence																																																													.														.
Query Sequence		K	L	L	T	L	E	D	K	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	.	L	D	N	P	Y	I	V	R	M	I	G	I	C	.	E	A	E	S	W	M
Query Conservation																																																													.														.
Alig confidence																													.	.															.	.	.	.	.	.											.														.
Template Conservation																													.	.															.	.	.	.	.	.
Template Sequence		T	D	G	Y	E	V	K	E	D	I	G	V	G	S	Y	S	V	C	K	R	C	I	H	K	A	T	N	.	.	M	E	F	A	V	K	I	I	D	K	S	K	R	D	.	.	.	.	.	.	P	T	E	E	I	E	I	L	L	R	Y	G	Q	H	P	N	I	I	T	L	K	D	V	Y	D	D	G	K	Y	V	Y
Template Known Secondary structure		T	T	T											S	S									T	T	T	T	.	.										T	T	T			.	.	.	.	.	.	T											T	T	S	T	T	B										S	S
Template Predicted Secondary structure																													.	.															.	.	.	.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.			.	.	.	.	450	.	.	.	.	.	.	.	.	.							460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.					.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	.	.	.	.	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A
Query Conservation																																																															.	.	.	.
Alig confidence																																																															.	.	.	.
Template Conservation
Template Sequence		V	V	T	E	L	M	K	G	G	E	L	L	D	K	I	L	R	Q	K	F	F	S	E	R	E	A	S	A	V	L	F	T	I	T	K	T	V	E	Y	L	H	A	Q	G	V	V	H	R	D	L	K	P	S	N	I	L	Y	V	D	E	S	G	N	P	E	S	I	R	I	C	D	F	G	F	A	K	Q	L	R	A
Template Known Secondary structure									S		B							T		T	T																							T	T				S				G	G	G				S	S	S	S			G	G	G							T	T					B
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.				.	580	.	.	.	.	.	.	.	.	.	590	.	.	.				.	.
Predicted Secondary structure																																																											.	.	.																.	.	.
Query SS confidence																																																											.	.	.																.	.	.
Query Sequence		D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	.	.	.	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	.	.	.	P	A
Query Conservation																																																											.	.	.																.	.	.
Alig confidence															.	.	.																															.											.	.	.																.	.	.
Template Conservation															.	.	.																															.
Template Sequence		E	N	G	L	L	M	T	P	C	Y	T	A	N	.	.	.	F	V	A	P	E	V	L	E	R	Q	G	Y	D	A	A	C	D	I	W	S	L	G	V	L	L	Y	T	M	L	T	.	G	Y	T	P	F	A	N	G	P	D	D	T	P	E	E	I	L	A	R	I	G	S	G	K	F	S	L	S	G	G	Y	W	N
Template Known Secondary structure		T	T	S		B			S	S				S	.	.	.																															.	S	S		S	S		S	S	T	T	S												T					S	S
Template Predicted Secondary structure															.	.	.																															.
Template SS confidence
		571	.	.	.	.	.	.	.	.	580	.	.	.				.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.		.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y	Y	Y	D
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		S	V	S	D	T	A	K	D	L	V	S	K	M	L	H	V	D	P	H	Q	R	L	T	A	A	L	V	.	.	.	L	R	H	P	W	I	V
Template Known Secondary structure		T	S												S		S	S	T	T	T	S							.	.	.		T	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.				.	.	.	.	.	.	680

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions