Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 123 Aligned Residues 259 % Identity 36% Template c2qofA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase and juxtamembrane region, y596f mutant Resolution 1.20 Å

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		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		Y	A	D	P	E	E	I	R	P	K	E	V	Y	L	D	R	K	L	L	T	L	E	D	K	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	.	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P
Query Conservation																																										.
Alig confidence																							.																			.																	.
Template Conservation																							.																																				.
Template Sequence		F	V	D	P	Q	T	V	H	E	F	A	K	E	L	D	A	T	N	I	S	I	.	D	K	V	V	G	A	G	E	F	G	E	V	C	S	G	R	L	K	L	P	S	K	K	E	I	S	V	A	I	K	T	L	K	V	G	.	Y	T	E	K	Q	R	R	D	F	L	G	E	A	S	I	M	G	Q	F	D	H	P
Template Known Secondary structure												S		B			G	G	G				.								S	S	S										T	T	S												T	T	.																	T	T				T
Template Predicted Secondary structure																							.																																				.
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.		.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.		.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
		431	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460		.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																						.
Query SS confidence											.																						.
Query Sequence		Y	I	V	R	M	I	G	I	C	.	E	A	E	S	W	M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	.	Q	Q	N	R	H	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A
Query Conservation											.																						.
Alig confidence											.																						.
Template Conservation
Template Sequence		N	I	I	R	L	E	G	V	V	T	K	S	K	P	V	M	I	V	T	E	Y	M	E	N	G	S	L	D	S	F	L	R	K	H	D	A	Q	F	T	V	I	Q	L	V	G	M	L	R	G	I	A	S	G	M	K	Y	L	S	D	M	G	Y	V	H	R	D	L	A	A	R	N	I	L	I	N	S	N	L	V	C
Template Known Secondary structure		T	B									S	S	S	S									T	T		B							T	T	T	T		S																						T	T				S				G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	S	D	F	P	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	T	S	P	E	A	I	A	Y	R	K	F	T	S	A	S	D	V	W	S	Y	G	I	V	L	W	E	V	M	S	Y	G	E	R	P	Y	W	E	M	S	N	Q	D	V	I	K	A	V	D	E	G
Template Known Secondary structure								G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S																												T	T	S			T	T	T	T												T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		761	.	.	.	.	.	.	.																						.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	M	G	C	P	A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y	Y	Y	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	L	P	P	P	M	D	C	P	A	A	L	Y	Q	L	M	L	D	C	W	Q	K	D	R	N	N	R	P	K	F	E	Q	I	V	S	I	L	D	K	L	I	R	N	P
Template Known Secondary structure								T	T		B											T		S	S	G	G	G	S																S	G
Template Predicted Secondary structure
Template SS confidence
		841	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions