Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 184 Aligned Residues 223 % Identity 21% Template c2onlD_ PDB info PDB header:transferase Chain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer Resolution 4.00 Å

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		374	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.						.	.	.	.	.
Predicted Secondary structure										.																																															.															.	.	.	.	.
Query SS confidence										.																																															.															.	.	.	.	.
Query Sequence		D	K	E	L	G	S	G	N	.	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	.	D	N	P	Y	I	V	R	M	I	G	I	C	E	A	.	.	.	.	.	E	S	W	M	L
Query Conservation										.																																															.															.	.	.	.	.
Alig confidence										.									.	.																	.	.	.	.	.	.	.														.															.	.	.	.	.
Template Conservation																			.	.																	.	.	.	.	.	.	.
Template Sequence		G	L	Q	I	K	K	N	A	I	I	D	D	V	L	Q	I	F	.	.	N	K	R	T	Q	E	K	F	A	L	K	M	L	Q	D	C	.	.	.	.	.	.	.	P	K	A	R	R	E	V	E	L	H	W	R	A	S	Q	C	P	H	I	V	R	I	V	D	V	Y	E	N	L	Y	A	G	R	K	C	L	L	I
Template Known Secondary structure						B		S			S								.	.		T	T	T												S	.	.	.	.	.	.	.												T	T			S	T	T	B												T	T
Template Predicted Secondary structure																			.	.																	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.								.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.			.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.				.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																				.	.																																									.	.	.
Query SS confidence																				.	.																																									.	.	.
Query Sequence		V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	.	.	H	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	.	.	.	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A
Query Conservation																				.	.																																									.	.	.
Alig confidence																				.	.																																									.	.	.
Template Conservation
Template Sequence		V	M	E	C	L	D	G	G	E	L	F	S	R	I	Q	D	R	G	D	Q	A	F	T	E	R	E	A	S	E	I	M	K	S	I	G	E	A	I	Q	Y	L	H	S	I	N	I	A	H	R	D	V	K	P	E	N	L	L	Y	T	S	K	R	P	N	A	I	L	K	L	T	D	F	G	F	A	K	E	T	T	S
Template Known Secondary structure								S									S		S	S				B																					T	T								G	G	G				S	S	S	S	T	T									S	S						S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	P	A	G	C	P	R	E	M
Query Conservation
Alig confidence														.	.	.	.																															.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.																															.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	N	S	L	T	T	P	C	Y	T	P	Y	.	.	.	.	Y	V	A	P	E	V	L	G	P	E	K	Y	D	K	S	C	D	M	W	S	L	G	V	I	M	Y	I	L	L	C	.	G	Y	P	P	F	Y	E	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	E	W	S	E	V	S	E	E	V
Template Known Secondary structure								S	S			S	S	.	.	.	.	S							S	S	S																				T	.	S	S							S	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T			S		T	T
Template Predicted Secondary structure														.	.	.	.																															.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.														.	.	270	.	.	.	.	.	.	.	.
		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	M	L	I	R	N	L	L	K	T	E	P	T	Q	R	M	T	I	T	E	F	M
Template Known Secondary structure								T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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