Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 174 Aligned Residues 256 % Identity 15% Template c2jiiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk3 molecule: vaccinia PDBTitle: structure of vaccinia related kinase 3 Resolution 2.00 Å

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		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.									.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.			440
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.																						.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.																						.	.
Query Sequence		T	L	E	D	K	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	.	.	.	.	.	.	.	.	A	E	A	N	V	M	Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	.	.	E
Query Conservation																																																		.	.	.	.	.	.	.	.																						.	.
Alig confidence																									.	.	.	.	.																					.	.	.	.	.	.	.	.																						.	.
Template Conservation																									.	.	.	.	.
Template Sequence		W	K	L	K	S	F	Q	T	R	D	N	Q	G	I	L	Y	E	A	A	P	T	S	K	.	.	.	.	.	F	S	L	K	L	D	A	K	D	G	R	L	F	N	E	Q	N	F	F	Q	R	A	A	K	P	L	Q	V	N	K	W	K	K	L	Y	S	T	P	L	L	A	I	P	T	C	M	G	F	G	V	H	Q
Template Known Secondary structure												T	T												.	.	.	.	.								T	T	S	T																								T	T		T	T		S											T
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.			.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.			510	.	.	.	.	.	.
Predicted Secondary structure																											.	.																																													.	.
Query SS confidence																											.	.																																													.	.
Query Sequence		A	E	S	W	M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	.	.	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	.	.	I	S	D	F	G	L	S
Query Conservation																											.	.																																													.	.
Alig confidence													.														.	.																																													.	.
Template Conservation													.
Template Sequence		D	K	Y	R	F	L	V	L	P	S	L	.	G	R	S	L	Q	S	A	L	D	V	S	P	K	H	V	L	S	E	R	S	V	L	Q	V	A	C	R	L	L	D	A	L	E	F	L	H	E	N	E	Y	V	H	G	N	V	T	A	E	N	I	F	V	D	P	E	D	Q	S	Q	V	T	L	A	G	Y	G	F	A
Template Known Secondary structure		T	T										.											S	G	G	G																								T	T		B		S				G	G	G					T	T										G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.					.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.			.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.																																									.	.															.	.
Query SS confidence																				.	.	.	.																																									.	.															.	.
Query Sequence		K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K	W	.	.	.	.	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	.	.	G	M	K	G	S	E	V	T	A	M	L	E	K	G	.	.
Query Conservation																				.	.	.	.																																									.	.															.	.
Alig confidence																				.	.	.	.																																		.							.	.															.	.
Template Conservation																																																									.
Template Sequence		F	R	Y	C	P	S	G	K	H	V	A	Y	V	E	G	S	R	S	P	H	E	G	D	L	E	F	I	S	M	D	L	H	K	G	C	G	P	S	R	R	S	D	L	Q	S	L	G	Y	C	M	L	K	W	L	Y	.	G	F	L	P	W	T	N	C	L	P	N	T	E	D	I	M	K	Q	K	Q	K	F	V	D
Template Known Secondary structure		B		S	S	G	G	G							T	T	S	S		T	T		S		T	T	T							T	T																						.	S			T	T	G	G	G	T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
								589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	R	M	G	C	P	A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y	Y	Y	D	V
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	G	P	F	V	G	P	C	G	H	W	I	R	P	S	E	T	L	Q	K	Y	L	K	V	V	M	A	L	T	Y	E	E	K	P	P	Y	A	M	L	R	N	N	L	E	A	L	L	Q	D	L
Template Known Secondary structure		S							T	T	S																		T			T	T																			T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions