Job Description P43405 Confidence 100.00% Date Fri May 25 09:37:32 BST 2012 Rank 242 Aligned Residues 238 % Identity 21% Template c2i6lB_ PDB info PDB header:transferase Chain: B: PDB Molecule:mitogen-activated protein kinase 6; PDBTitle: crystal structure of human mitogen activated protein kinase2 6 (mapk6) Resolution 2.25 Å

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		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.							.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	E	A	E	S	.	.	.	.	.	.	W	M	L	V	M	E
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																					.	.												.	.																																			.	.	.	.	.	.
Template Conservation																					.	.												.	.
Template Sequence		D	L	K	P	L	G	N	G	L	V	F	S	A	V	D	N	D	C	D	.	.	K	R	V	A	I	K	K	I	V	L	T	.	.	D	P	Q	S	V	K	H	A	L	R	E	I	K	I	I	R	R	L	D	H	D	N	I	V	K	V	F	E	I	L	G	P	S	G	S	Q	L	T	D	S	V	Y	I	V	Q	E
Template Known Secondary structure									T	T							T	T	T	T	.	.												.	.						T															T	T	B									S	S	S		B
Template Predicted Secondary structure																					.	.												.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	V	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q
Query Conservation
Alig confidence													.	.																																																														.	.	.	.	.	.
Template Conservation													.	.																																																														.	.	.	.	.	.
Template Sequence		Y	M	E	T	D	L	A	N	V	L	E	.	.	Q	G	P	L	L	E	E	H	A	R	L	F	M	Y	Q	L	L	R	G	L	K	Y	I	H	S	A	N	V	L	H	R	D	L	K	P	A	N	L	F	I	N	T	E	D	L	V	L	K	I	G	D	F	H	L	S	E	G	L	V	T	K	.	.	.	.	.	.
Template Known Secondary structure												T	.	.	T																									T	T				S			S	G	G	G					T	T	T	T										S	G	G	G	S			.	.	.	.	.	.
Template Predicted Secondary structure													.	.																																																														.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																	.
Template Sequence		.	.	.	.	.	.	W	Y	R	S	P	R	L	L	L	S	P	N	N	Y	T	K	A	I	D	M	W	A	A	G	C	I	F	A	E	M	L	T	.	G	K	T	L	F	A	G	A	H	E	L	E	Q	M	Q	L	I	L	E	S	I	P	V	V	H	E	E	D	R	Q	E	L	L	S	V	I	P	V	M	T	E
Template Known Secondary structure		.	.	.	.	.	.	T	T								S	T	T																					.	S	S		S	S			S	S										T	T	S				S																S
Template Predicted Secondary structure		.	.	.	.	.	.																																	.
Template SS confidence
								196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
										594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	P	A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	A	A	V	E	L	R	L	R	N	Y	Y	Y	D	V	V	N
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																														.	.	.
Template Conservation																																							.	.	.
Template Sequence		P	H	K	P	L	T	Q	L	L	P	G	I	S	R	E	A	V	D	F	L	E	Q	I	L	T	F	S	P	M	D	R	L	T	A	E	E	A	.	.	.	L	S	H	P	Y	M	S	I	Y	S
Template Known Secondary structure			S	S						S	T	T											T	T	S		S	S	G	G	G	S							.	.	.			S					T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions