Return to main results Retrieve Phyre Job Id

Job DescriptionP43405
Confidence100.00%DateFri May 25 09:37:32 BST 2012
Rank202Aligned Residues234
% Identity18%Templatec2h34B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase pkne; PDBTitle: apoenzyme crystal structure of the tuberculosis serine/threonine2 kinase, pkne
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400....... ..410.........420.........430......... 440........
Predicted Secondary structure 
















.






.


Query SS confidence 




































.































.








Query Sequence  TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE. ANDPALKDELLAEANVMQQLDNPYIVRMIGIC. EAESWMLVM
Query Conservation        

 
 

 
             



 
   .            
   
  
 




 
 
  .      

 
Alig confidence 























..










.































.








Template Conservation 
     

 
  
 

 
      ..  



                  
      
 
  
                 
Template Sequence  YRLRRLVGRGGXGDVYEAEDTVRE. . RIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDX
Template Known Secondary structure 
SS
TTTT..
TTTTSS


TTB

TT
Template Predicted Secondary structure 






..

























Template SS confidence 















































































   16...20.........30......... 40.........50.........60.........70.........80.........90...
 
   449450.........460.........470.........480.........490.........500.........510.........520........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA
Query Conservation 
    
 
   
                

  

 


   






  



      

 




            
Alig confidence 


































































.............
Template Conservation                                                                 
   .............
Template Sequence  RLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGI. . . . . . . . . . . . .
Template Known Secondary structure 




T
S

TT






GGG
GGG

SSB
.............
Template Predicted Secondary structure 










































.............
Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160
 
   529530.........540.........550.........560.........570.........580.........590.. .......600......
Predicted Secondary structure 




























..





Query SS confidence 































































. .













Query Sequence  QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG. . CPAGCPREMYDLMN
Query Conservation        
    


       
  




 

 
 
  
 
  
            
       .. 
   
     

 
Alig confidence  .....










....


















.























..













Template Conservation  .....       

  ....    






 




 
.
  

           
                 
  

 
Template Sequence  . . . . . GTLYYXAPERF. . . . SEYRADIYALTCVLYECLT. GSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPVAFDAVIA
Template Known Secondary structure  .....

TTS

GGGG....



.SS
SS
SSTS



GGGTSTT

T
Template Predicted Secondary structure  .....








....



.


















Template SS confidence 















































































   177..180....... ..190.........200...... ...210.........220.........230.........240......
 
   607..610...... ...620.........
Predicted Secondary structure 




.

Query SS confidence 









.












Query Sequence  LCWTYDVENR. PGFAAVELRLRNY
Query Conservation   
    
  
.

   
   
   
Alig confidence 









.












Template Conservation    
  

  
  

 

   
   
Template Sequence  RGXAKNPEDRYVTCGDLSAAAHAA
Template Known Secondary structure  S
SSGGGS
SS
Template Predicted Secondary structure 







Template SS confidence 























   251........260.........270....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions