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Job DescriptionP43405
Confidence100.00%DateFri May 25 09:37:32 BST 2012
Rank84Aligned Residues251
% Identity22%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400.........410.........420.........430.........440... ......
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Query Sequence  TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES. WMLVME
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Template Sequence  WDLVQTLGEGAYGEVQLAVNRVTE. . EAVAVKIVDMKRCP. . . . ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE
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SSTTT
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   910.........20.........30.. .......40...... ...50.........60.........70.........80..
 
   450.........460.........470.........480.........490.........500.........510.........520.........
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Query Sequence  MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ
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Template Sequence  YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN
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TTGGGGSBTTTB

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S

SGGG
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B
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   530.........540......... 550.........560.........570.........580..... ....590.........600......
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Query Sequence  THGKWPVKWYAPECINYYKF. SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML. . EKGERMGCPAGCPREMYDLMN
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Template Sequence  KMCGTL. PYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH
Template Known Secondary structure  S

S
G.GGS

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   166...170. ........180.........190.........200... ......210.........220.........230.........240...
 
   607..610.........620.........630..
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Query Sequence  LCWTYDVENRPGFAAVELRLRNYYYD
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Template Sequence  KILVENPSARITIPDI. . . KKDRWYN
Template Known Secondary structure  S
SSTTTS

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   244.....250......... 260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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