01/06/2012 20:00:26 : INFO  : Run start: Fri Jun  1 20:00:26 BST 2012
01/06/2012 20:00:26 : INFO  : Initialised job
01/06/2012 20:00:26 : INFO  : Initialised job:
Sequence
>batch____
MASSGMADSANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRK
AHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNRPQGVQPKTGPF
EDLKENLIREYVKQTWNLQGQALEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQ
IVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQL
VEHYSYKADGLLRVLTVPCQKIGTQGNVNFGGRPQLPGSHPATWSAGGIISRIKSYSFPK
PGHRKSSPAQGNRQESTVSFNPYEPELAPWAADKGPQREALPMDTEVYESPYADPEEIRP
KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE
ANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM
GMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA
PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE
MYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN

01/06/2012 20:00:26 : INFO  : Checked sequence
01/06/2012 20:00:26 : INFO  : Finding homologues with PSI-BLAST
01/06/2012 20:00:26 : INFO  : PSI-BLAST 3 iterations
01/06/2012 20:03:32 : INFO  : PSI-BLAST 5 iterations
01/06/2012 20:07:36 : INFO  : Finished PSI-BLAST
01/06/2012 20:07:36 : INFO  : Running Buildali to generate a3m file
01/06/2012 21:37:39 : INFO  : Converting to HMM
01/06/2012 21:38:26 : INFO  : Calibrating HMM
01/06/2012 21:38:38 : INFO  : Searching HMM database
01/06/2012 21:48:45 : INFO  : Finished buildali
01/06/2012 21:48:45 : INFO  : Predicting secondary structure
01/06/2012 21:48:45 : INFO  : Predicted secondary structure (PSI-Pred)
01/06/2012 21:48:45 : INFO  : Predicting Disordered regions
01/06/2012 21:48:45 : INFO  : Predicted Disorder (Disopred)
01/06/2012 21:48:45 : INFO  : Running memsat_svm check
01/06/2012 22:13:50 : INFO  : Globular protein
01/06/2012 22:13:50 : INFO  : Predicted Transmembrane (memsat_svm) ID '2db15a2455b16f33'
01/06/2012 22:13:50 : INFO  : Initialising fold library search
01/06/2012 22:13:50 : INFO  : Initialised search input
01/06/2012 22:13:50 : INFO  : Building Ensemble models
01/06/2012 22:13:50 : INFO  : Building hh.c2ozoA_.model.1.pdb
01/06/2012 22:13:50 : INFO  : Building c2ozoA_.1.pdb
01/06/2012 22:13:51 : INFO  : Building c2fo0A_.2.pdb
01/06/2012 22:13:51 : INFO  : Building c1oplA_.3.pdb
01/06/2012 22:13:51 : INFO  : Building c1y57A_.4.pdb
01/06/2012 22:13:52 : INFO  : Building c2h8hA_.5.pdb
01/06/2012 22:13:52 : INFO  : Building c1k9aB_.6.pdb
01/06/2012 22:13:53 : INFO  : Building c2c0iA_.7.pdb
01/06/2012 22:13:53 : INFO  : Building c3cblA_.8.pdb
01/06/2012 22:13:54 : INFO  : Building c2j0kB_.9.pdb
01/06/2012 22:13:54 : INFO  : Building c2oq1A_.10.pdb
01/06/2012 22:13:54 : INFO  : Building d1u59a_.11.pdb
01/06/2012 22:13:55 : INFO  : Building c3zzwA_.12.pdb
01/06/2012 22:13:55 : INFO  : Building c3pfqA_.13.pdb
01/06/2012 22:13:56 : INFO  : Building d1qcfa3.14.pdb
01/06/2012 22:13:56 : INFO  : Building c2acxB_.15.pdb
01/06/2012 22:13:56 : INFO  : Building c3qa8A_.16.pdb
01/06/2012 22:13:57 : INFO  : Building d1opja_.17.pdb
01/06/2012 22:13:57 : INFO  : Building d1xbba_.18.pdb
01/06/2012 22:13:58 : INFO  : Building c1ym7C_.19.pdb
01/06/2012 22:13:58 : INFO  : Building c2ivsA_.20.pdb
01/06/2012 22:14:01 : INFO  : Finished HH model building
01/06/2012 22:14:01 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
01/06/2012 22:14:04 : INFO  : html domain output complete ID '2db15a2455b16f33'
01/06/2012 23:43:55 : INFO  : Run end  : Fri Jun  1 23:43:55 BST 2012
