261 c2vagA_ Probab=100.00  E-value=2.4e-35  Score=217.20  Aligned_columns=259  Identities=25%

Q ss_pred             HHEEECCCEECCCCCCEEEEEEECCCCCCEEEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCCE------EEEEEEEEC
Q ss_conf             45131077220167737999998328982589999875022798999999999999984598956------259999966
Q batch____       368 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI------VRMIGICEA  441 (635)
Q Consensus       368 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~~E~~~l~~l~hpni------v~l~g~~~~  441 (635)
                      ...+...++||+|+||.||+|+.. ..++..||||+++   ......+.+.+|+++|+.++|+|+      +.+.+....
T Consensus        12 ~~~Y~i~~~LG~G~fG~V~~a~~~-~~~~~~vAiK~i~---~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~   87 (330)
T c2vagA_          12 SARYEIVDTLGEGAFGKVVECIDH-KAGGRHVAVKIVK---NVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH   87 (330)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET-TTTTEEEEEEEEC---SSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred             CCCEEEEEEEEECCCEEEEEEEEE-CCCCEEEEEEEEC---CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC
T ss_conf             782599999876288489999997-6798399999983---990568999999999998431222331222000012333


Q ss_pred             CCEEEEEECCCCCCHHHHH--HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEECCCCEEEECCCCCCEEC
Q ss_conf             9879999888987199999--85589889999999999999999998779370157832478778982998433341311
Q batch____       442 ESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL  519 (635)
Q Consensus       442 ~~~~lv~E~~~~g~L~~~l--~~~~~~~~~~~~~~~~qi~~gl~yLh~~~ivHrDlk~~Nill~~~~~~Ki~DFGla~~~  519 (635)
                      ...+..+.....++.....  .............+..+++.++.++|..+++|+|++|+|||++.++..++.|||.++..
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~  167 (330)
T c2vagA_          88 HGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTL  167 (330)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEE
T ss_pred             CCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCC
T ss_conf             20000122112367521112221110136565555544555554311012222345541589857886200034543344


Q ss_pred             CCC--------CCEEEEECCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC----
Q ss_conf             588--------84367312554687777968983799864789999999999999588999998898999999982----
Q batch____       520 RAD--------ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----  587 (635)
Q Consensus       520 ~~~--------~~~~~~~~~~~~p~~~~aPE~~~~~~~s~~sDvwS~Gv~l~E~~t~G~~P~~~~~~~~~~~~i~~----  587 (635)
                      ...        ...............+.+||......++.++|+|++|+++|++.+ +..|+...+..+....+..    
T Consensus       168 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~  246 (330)
T c2vagA_         168 INPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGP  246 (330)
T ss_dssp             SCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCS
T ss_pred             CCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             44321000146633267542001210232100000111123542102258731004-88988758968999999851388


Q ss_pred             ---------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
Q ss_conf             ---------------------------------------99888986799999999998625897786999999999987
Q batch____       588 ---------------------------------------GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
Q Consensus       588 ---------------------------------------~~~~~~p~~~p~~~~~li~~c~~~~p~~Rpt~~~i~~~l~~  628 (635)
                                                             ......+..+++++.+||++||+.||++|||+.+|   |++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~el---L~H  323 (330)
T c2vagA_         247 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA---LKH  323 (330)
T ss_dssp             CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH---TTS
T ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHH---HCC
T ss_conf             99889744201212354656653210001110012333100235654589999999998665881117767899---679


Q ss_pred             HHHHHC
Q ss_conf             636415
Q batch____       629 YYYDVV  634 (635)
Q Consensus       629 ~~~~~~  634 (635)
                      .|++.+
T Consensus       324 p~f~~i  329 (330)
T c2vagA_         324 PFFDLL  329 (330)
T ss_dssp             GGGGGG
T ss_pred             CCHHHC
T ss_conf             114403


