Job Description A0AV02 Confidence 6.98% Date Wed Jun 6 09:26:36 BST 2012 Rank 38 Aligned Residues 144 % Identity 8% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.							.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		G	G	D	L	R	E	P	A	A	S	I	P	P	G	S	L	A	A	V	G	I	S	W	F	L	Y	I	I	.	.	.	.	.	.	F	V	F	L	L	G	A	I	C	T	R	E	A	L	R	Y	D	F	L	I	A	E	K	V	S	L	M	G	F	L	F	L	L	G	L	Y	I	S	S	L	A	S	C	M	G	G
Query Conservation																														.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	F	L	P	D	S	G	N	Q	A	P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A
Template Known Secondary structure		B		S	S					T	T																			T	T		S	S	S					G	G	G																T	T			B
Template Predicted Secondary structure
Template SS confidence
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	G	A	P	R	I	L	Q	C	I	A	Q	E	K	V	I	P	A	L	A	C	L	G	Q	G	K	G	P	N	K	T	P	V	A	A	I	C	L	T	S	L	V	T	M	A	F	V	F	V	G	Q	V	N	V	L	A	P	I	V	T	I	N	F	M	L	T	Y	V	A	V
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	.	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V
Template Known Secondary structure												T	T	S	S				T	T	.									T	T																				T	T		S	S	S
Template Predicted Secondary structure																					.
Template SS confidence
		943	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.		.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions