Job Description A0AV02 Confidence 8.05% Date Wed Jun 6 09:26:36 BST 2012 Rank 28 Aligned Residues 145 % Identity 8% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		M	G	G	D	L	R	E	P	A	A	S	I	P	P	G	S	L	A	A	V	G	I	S	W	F	L	Y	.	.	I	I	F	V	F	L	L	G	A	I	C	T	R	E	A	L	R	Y	D	F	L	I	A	E	K	V	S	L	M	G	F	L	F	L	L	G	L	Y	I	S	S	L	A	S	C	M	G	G	L	Y	G
Query Conservation																													.	.
Alig confidence																													.	.
Template Conservation
Template Sequence		V	K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V
Template Known Secondary structure																										T	T				T	T	T	T	T																			T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	R	I	L	Q	C	I	A	Q	E	K	V	I	P	A	L	A	C	L	G	Q	G	K	G	P	N	K	T	P	V	A	A	I	C	L	T	S	L	V	T	M	A	F	V	F	V	G	Q	V	N	V	L	A	P	I	V	T	I	N	F	M	L	T	Y	V	A	V
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		V	E	N	V	E	R	V	M	A	E	E	G	L	P	P	K	.	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A
Template Known Secondary structure												T	S			S		.						G	G	G	T																	T	T	T	T				T	T	S
Template Predicted Secondary structure																		.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions