Job Description A0AV02 Confidence 4.38% Date Wed Jun 6 09:26:36 BST 2012 Rank 84 Aligned Residues 62 % Identity 13% Template c2vl0A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:elic pentameric ligand gated ion channel from PDBTitle: x-ray structure of a pentameric ligand gated ion channel2 from erwinia chrysanthemi (elic) Resolution 3.3 Å

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		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.						.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		P	V	A	A	I	C	L	T	S	L	V	T	M	A	F	V	F	V	G	Q	V	N	V	L	.	.	.	.	.	A	P	I	V	T	I	N	F	M	L	T	Y	V	A	V	D	Y	S	Y	F	S	L	S	M	C	S	C	S	L	T	P	V	P	E	P	V	L	R
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.
Template Conservation
Template Sequence		E	R	L	Q	T	S	F	T	L	M	L	T	V	V	A	Y	A	F	Y	T	S	N	I	L	P	R	L	P	Y	T	T	V	I	D	Q	M	I	I	A	G	Y	G	S	I	F	A	A	I	L	L	I	I	F	A	H	H	R	Q	A	N	G	V	E	D	D	L	L
Template Known Secondary structure																									S				S	S																										T	T	S	S	S	S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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