Job Description A0AV02 Confidence 27.05% Date Wed Jun 6 09:26:36 BST 2012 Rank 15 Aligned Residues 352 % Identity 10% Template c2rh1A_ PDB info PDB header:membrane protein / hydrolase Chain: A: PDB Molecule:beta-2-adrenergic receptor/t4-lysozyme chimera; PDBTitle: high resolution crystal structure of human b2-adrenergic g protein-2 coupled receptor. Resolution 2.40 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		F	T	V	F	G	V	F	F	P	A	A	T	G	V	M	A	G	F	N	M	G	G	D	L	R	E	P	A	.	A	S	I	P	P	G	S	L	A	A	V	G	I	S	W	F	L	Y	I	I	F	V	F	L	L	G	A	I	C	T	R	E	A	L	R	Y	D	F	L	I	A	E	K	V	S	L	M	G	F	L	F
Query Conservation																														.
Alig confidence																														.																								.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		M	G	I	V	M	S	L	I	V	L	A	I	V	F	G	N	V	L	V	I	T	A	I	A	K	F	E	R	L	Q	T	V	T	N	Y	F	I	T	S	L	A	C	A	D	L	V	M	G	L	A	V	V	.	.	.	.	.	.	P	F	G	A	A	H	I	L	M	K	M	W	T	F	G	N	F	W	C	E	F	W
Template Known Secondary structure																												G	G	G		S																				T		.	.	.	.	.	.										T	S			S
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	G	L	Y	I	S	S	L	A	S	C	M	G	G	L	Y	G	A	P	R	I	L	Q	C	I	A	Q	E	K	V	I	P	A	L	A	C	L	G	Q	G	K	G	P	N	K	T	P	V	A	A	I	C	L	T	S	L	V	T	M	A	F	V	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.
Template Sequence		T	S	I	D	V	L	C	V	T	A	S	I	E	T	L	C	V	I	A	V	D	R	Y	F	A	I	T	S	.	.	.	.	.	.	.	P	F	K	Y	Q	S	L	L	T	K	N	K	A	R	V	I	I	L	M	V	W	I	V	S	G	L	T	S	F	L	P	I	Q	M	H	W	Y	R	A	T	H	Q	E	A	I
Template Known Secondary structure																													S	.	.	.	.	.	.	.	S	S	T	T	S		S	S																										T	T	T	T				S
Template Predicted Secondary structure																														.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
														378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	Q	V	N	V	L	A	P	I	V	T	I	N	F	M	L	T	Y	V	A	V	D	Y	S	Y	F	S	L	S	M	C	S	C	S	L	T	P	V	P	E	P	V	L	R	E	G	A	E	G	L	H	C	S	E	H	L	L	L	E	K	A	P	S	Y	G	S	E	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																																				.
Template Conservation																																																																																	.
Template Sequence		N	C	Y	A	E	E	T	C	C	D	F	F	T	N	Q	A	Y	A	I	A	S	S	I	V	S	F	Y	V	P	L	V	I	M	V	F	V	Y	S	R	V	F	Q	E	A	K	R	Q	L	N	I	F	E	M	L	R	I	D	E	G	L	R	L	K	I	Y	K	D	T	E	G	Y	Y	T	I	G	I	G	H	L	.
Template Known Secondary structure							T	T																			T																							S									T										T	T	S						T	T			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	Q	R	V	L	E	G	T	L	L	E	F	T	K	D	M	D	Q	L	L	Q	L	T	R	K	L	E	S	S	Q	P	R	Q	G	E	G	N	R	T	P	E	S	Q	K	R	K	S	K	K	A	T	K	Q	T	L	Q	D	S	F	L	L	D	L	K	S	P	P	S	F	P	V	E	I	S	D	R	L	P	A
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	T	K	S	P	S	L	N	A	A	K	S	E	L	D	K	A	I	G	R	N	T	N	G	V	I	T	K	D	E	A	E	K	L	F	N	Q	D	V	D	A	A	V	R	G	I	L	R	N	A	K	L	K	P	V	Y	D	S	L	D	A	V	R	R	A	A	L	I	N	M	V	F	Q	M	G	E	T	G
Template Known Secondary structure		.	.			S		S														T	S			T	T	B																									T	T	T							S
Template Predicted Secondary structure		.	.
Template SS confidence
				1033	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	W	E	G	Q	E	S	C	W	N	K	Q	T	S	K	S	E	G	T	Q	P	E	G	T	Y	G	E	Q	L	V	P	E	L	C	N	Q	S	E	S	S	G	E	D	F	F	L	K	S	R	L	Q	E	Q	D	V	W	R	R	S	T	S	F	Y	T	H	M	C	N	P	W	V	S	L	L	G	A	V	G	S
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	G	F	T	N	S	L	R	M	L	Q	Q	K	R	W	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	V	N	L	A	K	S	R	W	Y	N	Q	T	P	N	R	A	K	R	V	I	T	T	F	R	T	G	T	W	D	A	Y	K	F	C	L	K	E	H	K	A	L	K	T	L	G	I
Template Known Secondary structure				T										T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S						S														S	S	S	G	G	G	T	T		S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1111	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.															.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.
		606	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	I	M	F	V	I	Q	W	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	G	T	F	T	L	C	W	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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