Job Description A0AV02 Confidence 26.54% Date Wed Jun 6 09:26:36 BST 2012 Rank 16 Aligned Residues 146 % Identity 14% Template c2kr6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:presenilin-1; PDBTitle: solution structure of presenilin-1 ctf subunit Resolution UNK

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		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	G	E	G	N	R	T	P	E	S	Q	K	R	K	S	K	K	A	T	K	Q	T	L	Q	D	S	F	L	L	D	L	K	S	P	P	S	F	P	V	E	I	S	D	R	L	P	A	A	S	W	E	G	Q	E	S	C	W	N	K	Q	T	S	K	S	E	G	T	Q	P	E	G	T	Y	G	E	Q	L	V	P
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	P	E	A	Q	R	R	V	S	K	N	S	K	Y	N	A	E	S	T	E	R	E	S	Q	D	T	V	A	E	N	D	D	G	G	F	S	E	E	W	E	A	Q	R	D	S	H	L	G	P	H	R	S	T	P	E	S	R	A	A	V	Q	E	L	S	S	S	I	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T						T	T	S		S																											S	S	S	S	S		S						S		T														.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	C	N	Q	S	E	S	S	G	E	D	F	F	L	K	S	R	L	Q	E	Q	D	V	W	R	R	S	T	S	F	Y	T	H	M	C	N	P	W	V	S	L	L	G	A	V	G	S	L	L	I	M	F	V	I	Q	W	V	Y	T	L	V	N	M	G	V	A	A	I	V	Y	F	Y	I	G	R	A	S	P	G
Query Conservation
Alig confidence		.	.	.	.																			.	.	.	.	.	.	.																									.	.	.
Template Conservation		.	.	.	.																			.	.	.	.	.	.	.																									.	.	.
Template Sequence		.	.	.	.	L	A	G	E	D	P	E	E	R	G	V	K	L	G	L	G	D	F	.	.	.	.	.	.	.	I	F	Y	S	V	L	V	G	K	A	S	A	T	A	S	G	D	W	N	T	T	I	A	C	.	.	.	F	V	A	I	L	I	G	L	C	L	T	L	L	L	L	A	I	F	K	K	A	L	P	A
Template Known Secondary structure		.	.	.	.	T			S				S	S			S	S		T	T	T		.	.	.	.	.	.	.														S			T	T	T	T					.	.	.																			T		S		S	S
Template Predicted Secondary structure		.	.	.	.																			.	.	.	.	.	.	.																									.	.	.
Template SS confidence
						369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.								.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410				.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		638	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	L	G	S	A	S	N	F	S	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	I	S	I	T	F	G	L	V	F	Y
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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