Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank34Aligned Residues270
% Identity36%Templated1t46a_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210..... ....220.........230.. .......240... ....
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Query Sequence  AQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR. . . . . . . GNKVAVKCIKNDATAQA. . . FLAEASVMTQL. RHSN
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Template Sequence  PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN
Template Known Secondary structure  TTTS


GGGB

GGG
SSSSSSTT

TT




TT
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   573......580.........590.........600.........610.........620.........630.........640.........650..
 
   248.250.........260.........270.........280... ......290.........300.........310.........320.....
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Query Sequence  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR. . SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED
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Template Sequence  IVNLLGAC. TIGGPTLVITEYCCYGDLLNFLRRKRDSFLALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG
Template Known Secondary structure  B

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SSSS


TTTTTT




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SGGGTT
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   653......660 .........670.........680.........690.........700.........710.........720.........730.
 
   326...330....... ..340.........350.........360.........370.........380.........390.........
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Query Sequence  NVAKVSDFGLTK. . . . . EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV.
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Template Sequence  RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI
Template Known Secondary structure  T


GGGS
TTS
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GGG





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   804.....810.........820.........830.........840.........850.........860.........870.........880...
 
   400.........410.........420.........430.........440.........
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Query Sequence  EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHELH
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Template Sequence  KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN
Template Known Secondary structure  T





TTS
T
SSGGGS

T

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   884.....890.........900.........910.........920.........930...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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