Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank233Aligned Residues253
% Identity21%Templated1q5ka_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.94

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210..... ....220.........230.........240.........250.........260. ........
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Query Sequence  LKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG. . . LYIVTEYM
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Template Sequence  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF. . KNRELQIMRKLDHCNIVRLRYFFYSSKKDEVYLNLVLDYV
Template Known Secondary structure  TTTTT



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   56...60.........70.........80.........90... ......100.........110.........120.........130...
 
   270.........280..... ....290.........300.........310.........320...... ...330....... ..340....
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Query Sequence  AKGSLVDYLRSRGRSV. LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN. VAKVSDFGLTK. . . EASSTQD
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Template Sequence  PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS
Template Known Secondary structure  STT



TTT




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   136...140.........150.........160.........170.........180.........190.........200.........210.....
 
   345....350.........360.........370.........380.........390.........
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Query Sequence  TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV. . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL. GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPEFKFPQIK
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   216...220.........230.........240.........250.. .......260.........270.........280.........290....
 
   400.........410.........420.........430........ .440.........450
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Query Sequence  EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE. . QLEHIKTHELHL
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Template Sequence  AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKL
Template Known Secondary structure 


GGGTS
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TSGGGGGGG
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   298.300.........310.........320.........330.........340.........350
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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