Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank11Aligned Residues268
% Identity43%Templated1opja_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210..... ....220........ .230.........240.........250.....
Predicted Secondary structure 




















..




.





Query SS confidence 




































. .












.


























Query Sequence  AQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKNDA. TAQAFLAEASVMTQLRHSNLVQLLGVI
Query Conservation            

      
   

 
 

 
      ..   



      .    
  
   
  
 




 
 
  
Alig confidence 




































..












.


























Template Conservation   
  
      
          

 
  
 

 
        



         
    
      
 
 


      
Template Sequence  DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC
Template Known Secondary structure 
TTSTT

TTB

GGGTTTTTTSSGGGT

TT
S



TTB

Template Predicted Secondary structure 






























Template SS confidence 















































































   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   256...260.........270.........280.........290.........300.........310.........320.........330.....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL
Query Conservation        
 

 
    
 
   
       
          


 

 


    

 

   


       

 



Alig confidence  .














































































Template Conservation  .       

 
    
 
   
                   
       
     
  

  

        

 


 
Template Sequence  . TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL
Template Known Secondary structure  .
SSSS


TT
BS
TTTS
TT


S

SGGG
GGG





Template Predicted Secondary structure  .





















































Template SS confidence 















































































   325....330.........340.........350.........360.........370.........380.........390.........400...
 
   336...340.... .....350.........360.........370.........380.........390.........400.........410.
Predicted Secondary structure 






....






























Query SS confidence 








. . . .


































































Query Sequence  TKEASSTQD. . . . TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC
Query Conservation 
        ....         


       
 








 
 

 
 
  

      

   
  
 
   
   
Alig confidence 








....


































































Template Conservation 
                   
 


           

 


 




 
 
  

                        
Template Sequence  SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC
Template Known Secondary structure  TTT

SSSSTT
GGG




STTS

SSTT

TT





TT
Template Predicted Secondary structure 


















































Template SS confidence 















































































   404.....410.........420.........430.........440.........450.........460.........470.........480...
 
   412.......420.........430.........440.......
Predicted Secondary structure 







Query SS confidence 



































Query Sequence  PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE
Query Conservation 
  
  

  
   

  


   
   
  
    
Alig confidence 



































Template Conservation     
  

   
   
  


  

   
  
    
Template Sequence  PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES
Template Known Secondary structure 
T
SSGGGS

TTSSS
Template Predicted Secondary structure 








Template SS confidence 



































   484.....490.........500.........510.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions