Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank42Aligned Residues244
% Identity39%Templated1mp8a_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210.... .....220......... 230.........240.........250.........260
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Query Sequence  GWALNMKELKLLQTIGKGEFGDVMLGDY. . . RGNKVAVKCIKNDAT. . . AQAFLAEASVMTQLRHSNLVQLLGVIVEEKG
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Template Sequence  DYEIQRERIELGRCIGEGQFGDVHQGIYMSPPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI. . TEN
Template Known Secondary structure 

B

GGG
SSS





TTTTST


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   414.....420.........430.........440.........450.........460.........470.........480........ .490.
 
   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS
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Template Sequence  PVWIIMELCTLGELRSFLQVRKYS. LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDLPIK. . . .
Template Known Secondary structure  S


TTTTTT.S
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S

SGGGTT



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   494.....500.........510....... ..520.........530.........540.........550.........560........
 
   341........350.........360.........370.........380.........390.........400.........410.........420
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Query Sequence  STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK
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Template Sequence  . . . . . . . . . . . WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT
Template Known Secondary structure  ...........G




STTS

TTTT

GGGTT





TT

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   588.590.........600.........610.........620.........630.........640.........650......
 
   421........430.........440........
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Query Sequence  NCWHLDAAMRPSFLQLREQLEHIKTHEL
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Template Sequence  KCWAYDPSRRPRFTELKAQLSTILEEEK
Template Known Secondary structure  T
SSGGGS

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   657..660.........670.........680....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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