Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank134Aligned Residues252
% Identity19%Templatec4apcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase nek1; PDBTitle: crystal structure of human nima-related kinase 1 (nek1)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.... .....200.........210..... ....220..... ....230.........240.........250......
Predicted Secondary structure 






..







..

....








Query SS confidence 









. .




















. .









. . . .






























Query Sequence  RSGWALNMKE. . LKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIK. . . . NDATAQAFLAEASVMTQLRHSNLVQLLGVIV
Query Conservation      

    ..  
   

 
 

 
      ..   



   ....       
  
   
  
 




 
 
   
Alig confidence 









..




















..









....






























Template Conservation                    

 
  
 

       
  



 
               

  
  
 




 
     
Template Sequence  HHHHDLGTENLYFQSMEKYVRLQKIKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE
Template Known Secondary structure 




TT
S

B
S





TTT


TT




TTB

Template Predicted Secondary structure 
























Template SS confidence 















































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions