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Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank216Aligned Residues235
% Identity26%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210..... ....220..... ....230.........240... ......250.........260....
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Query Sequence  KELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIK. . . . . NDATAQAFLAEASVMTQL. RHSNLVQLLGVIVEEKGGLYI
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF. QTPDRLFF
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   353......360.........370.........380.........390.........400.........410.........420... ......430.
 
   265....270.........280.........290.........300.........310.........320.........330.........340....
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Query Sequence  VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD
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Template Sequence  VMEFVNGGDLMFHIQKSRR. . FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICG. .
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   432.......440.........450 .........460.........470.........480.........490.........500.......
 
   345....350.........360.........370.........380.........390.........400.........410.........420....
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Query Sequence  TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWH
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Template Sequence  . . . . TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKSFMT
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   517..520.........530.........540......... 550.........560......... 570.........580.........590
 
   425....430.. ......
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Query Sequence  LDAAMRPS. . . . . . FLQLRE
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Template Sequence  KNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  SSGGGSTTSGGGT
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   591........600.........610
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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