Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank47Aligned Residues232
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   201........210..... ....220.........230.........240.........250.........260.........270........
Predicted Secondary structure 







..



















Query SS confidence 














. .






























































Query Sequence  IGKGEFGDVMLGDYR. . GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL
Query Conservation 

 
 

 
      ..   



          
  
   
  
 




 
 
        
 

 
    
 
   
Alig confidence 














..












.

























.





















Template Conservation 

 
 

 
            


 
    .      

  
  
 




      .       

 

  

 
   
Template Sequence  RKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. HEEIYNEISLLKSLDHPNIIKLFDVF. EDKKYFYLVTEFYEGGELFEQI
Template Known Secondary structure 

TTT



T.T


TTB

.
SS

TT
B
Template Predicted Secondary structure 







.




.







Template SS confidence 















































































   61........70.........80.........90 .........100.........110...... ...120.........130........
 
   279280.........290.........300.........310.........320.. .......330....... ..340.........350...
Predicted Secondary structure 

















...











..











Query SS confidence 











































. . .














. .















Query Sequence  RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV. . . SEDNVAKVSDFGLTK. . EASSTQDTGKLPVKWT
Query Conservation         
          


 

 


    

 

   


 ...      

 




 ..                
Alig confidence 




..




































...














..















Template Conservation       ..
 
     
  

   
  

     
  
   

           

 


 
                 
 
Template Sequence  INRHK. . FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI
Template Known Secondary structure  S
..

TT
S

SGGGSSTT

SS


TT


TTS
B



S
TTT
Template Predicted Secondary structure 


..












































Template SS confidence 















































































   157..160. ........170.........180.........190.........200.........210.........220.........230....
 
   354.....360.........370.........380.........390.........400......... 410.........420.........430
Predicted Secondary structure 























...







Query SS confidence 























































. . .




















Query Sequence  APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD. . . GCPPAVYEVMKNCWHLDAAMR
Query Conservation 


       
 








 
 

 
 
  

      

   
  
 
   
 ...  
  
  

  
   

  
Alig confidence 






.



















.


























...




















Template Conservation 


    .      








  
  .
  

           
               
    


   
  

  
Template Sequence  APEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKR
Template Known Secondary structure 
TT.
B
T.SS
SS

SS





TTS
T
SSTTTS
Template Predicted Secondary structure 


.





.

























Template SS confidence 















































































   235....240. ........250.........260. ........270.........280.........290.........300.........310..
 
   431.......
Predicted Secondary structure 

Query SS confidence 







Query Sequence  PSFLQLRE
Query Conservation 

   
  
Alig confidence 







Template Conservation   
  
 
 
Template Sequence  CTAEEALN
Template Known Secondary structure 

T
Template Predicted Secondary structure 


Template SS confidence 







   313......320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions