Job Description P41240 Confidence 100.00% Date Thu Apr 26 09:28:47 BST 2012 Rank 88 Aligned Residues 238 % Identity 23% Template c3p23B_ PDB info PDB header:hydrolase, transferase Chain: B: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the human kinase and rnase domains in complex2 with adp Resolution 2.70 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																				.
Query SS confidence																					.																																				.
Query Sequence		L	N	M	K	E	L	K	L	L	Q	T	I	G	K	G	E	F	G	D	.	V	M	L	G	D	Y	R	G	N	K	V	A	V	K	C	I	K	N	D	A	T	A	Q	A	F	L	A	E	A	S	V	M	T	Q	L	.	R	H	S	N	L	V	Q	L	L	G	V	I	V	E	E	K	G	G	L	Y	I	V	T	E
Query Conservation																					.																																				.
Alig confidence																					.																				.																.													.
Template Conservation																																									.																													.
Template Sequence		V	G	K	I	S	F	C	P	K	D	V	L	G	H	G	A	E	G	T	I	V	Y	R	G	M	F	D	N	R	D	V	A	V	K	R	I	L	P	E	.	C	F	S	F	A	D	R	E	V	Q	L	L	R	E	S	D	E	H	P	N	V	I	R	Y	F	C	T	E	.	K	D	R	Q	F	Q	Y	I	A	I	E
Template Known Secondary structure			S	S		B											S	T	T								S	S	S	S									T	T	.	T													T	S				T	T	B								.			S	S
Template Predicted Secondary structure																																									.																													.
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.		.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.		.	.	.	.	.	.	.	640	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.						.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		Y	M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	S	V	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V	H	R	D	L	A	A	R	N	V	L	V	S	E	D	N	V	.	.	.	.	.	A	K	V	S	D	F	G	L	T	K	E	A	S	S	T
Query Conservation																																																														.	.	.	.	.
Alig confidence					.														.																																											.	.	.	.	.															.
Template Conservation					.														.																																																														.
Template Sequence		L	C	A	.	A	T	L	Q	E	Y	V	E	Q	K	D	F	A	.	H	L	G	L	E	P	I	T	L	L	Q	Q	T	T	S	G	L	A	H	L	H	S	L	N	I	V	H	R	D	L	K	P	H	N	I	L	I	S	M	P	N	A	H	G	K	I	K	A	M	I	S	D	F	G	L	C	K	K	L	A	P	.
Template Known Secondary structure				S	.									S	S	S		S	.			S	S																			T	T							S	G	G	G							B	T	T	T	B									S								.
Template Predicted Secondary structure					.														.																																																														.
Template SS confidence
		644	.	.		.	.	.	650	.	.	.	.	.	.	.	.	.		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400			.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		Q	D	T	G	K	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V	V	P	R	V	E	.	.	K	G	Y	K	M	D	A	P	D	G	C	P	P	A	V	Y	E	V	M	K
Query Conservation																																																												.	.
Alig confidence		.	.	.	.	.																																																						.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	T	E	G	W	I	A	P	E	M	L	S	E	E	N	P	T	Y	T	V	D	I	F	S	A	G	C	V	F	Y	Y	V	I	S	E	G	S	H	P	F	G	K	S	L	Q	R	Q	A	N	I	L	L	G	A	C	S	L	D	C	L	H	P	E	K	H	E	D	V	I	A	R	E	L	I	E
Template Known Secondary structure		.	.	.	.	.			T	T	S			G	G	G	G	T						T																	T	S			S	S												T	T					T	T	S		T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	W	H	L	D	A	A	M	R	P	S	F	L	Q	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	M	I	A	M	D	P	Q	K	R	P	S	A	K	H	V	L
Template Known Secondary structure				T		S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		811	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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