Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank219Aligned Residues155
% Identity34%Templatec3nhnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: crystal structure of the src-family kinase hck sh3-sh2-linker2 regulatory region
Resolution2.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  GTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGKITRE
Query Conservation       
          

    

   

       
       
  
 

 
 
           
    

 
 
 
 
Alig confidence 

































.
























......













Template Conservation       

  
      

    

   
      . 
       
  
 

        
...... 
   

 
 
 
 
Template Sequence  DIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGE. WWKARSLATRKEGYIPSNYVARVDS. . . . . . LETEEWFFKGISRK
Template Known Secondary structure 

SS
B


STT


B
TT
TT.TTT

GGG

S......
TTSTTTT

Template Predicted Secondary structure 





















.










......






Template SS confidence 















































































   83......90.........100.........110...... ...120.........130.........140. ........150.....
 
   91..... ...100.........110.........120... ......130.... .....140.........150.........160..
Predicted Secondary structure  ..













.....
.













Query SS confidence 





. .


























. . . . .










.



























Query Sequence  QAERLL. . YPPETGLFLVRESTNYPGDYTLCVSCD. . . . . GKVEHYRIMYH. ASKLSIDEEVYFENLMQLVEHYTSDADG
Query Conservation   

 

..     
 



 
    
 
 


   .....  
 
  
   .     
     
 

  

  
     
Alig confidence 





..


























.....










.



























Template Conservation 


  
       
 



 
      
 


          
 
  
               
 

  

  
      
Template Sequence  DAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDG
Template Known Secondary structure  STT

SS

TTSTT
TTT
TTS
SSTT
SSTTT

TT
Template Predicted Secondary structure 


































Template SS confidence 















































































   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   163......170..
Predicted Secondary structure 









Query SS confidence 









Query Sequence  LCTRLIKPKV
Query Conservation 
   
  
  
Alig confidence 









Template Conservation 
   
  


Template Sequence  LCQKLSVPCM
Template Known Secondary structure  SSS


SB

Template Predicted Secondary structure 









Template SS confidence 









   237..240......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions