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Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank65Aligned Residues237
% Identity29%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210..... ....220.........230.........240.........250.........260.........270
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Query Sequence  KELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA
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Template Sequence  EMYQRVKKLGSGE. . . VLLCRDKVTHVERAIKIIRKSSN. SKLLEEVAVLKLLDHPNIMKLYDFF. EDKRNYYLVMECYK
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   60.........70.. .......80.........90..... ....100.........110.........120 .........130....
 
   271........280.........290.........300.........310.........320.. .......330....... ..340.....
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Query Sequence  KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV. . . SEDNVAKVSDFGLTK. . EASSTQDT
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Template Sequence  GGELFDEIIHRMK. . FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE
Template Known Secondary structure  S
BSS..

TT
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TT

BTTB
B

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   143......150..... ....160.........170.........180.........190.........200.........210.........220
 
   346...350.........360.........370.........380.........390.........400... ......410.........420..
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Query Sequence  GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY. . . KMDAPDGCPPAVYEVMKNC
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Template Sequence  RLGTAYYIAPEVLR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQM
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S
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   221........230.... .....240.........250..... ....260.........270.........280.........290........
 
   423......430........
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Query Sequence  WHLDAAMRPSFLQLRE
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Template Sequence  LQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   299300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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