Job Description P41240 Confidence 99.79% Date Thu Apr 26 09:28:47 BST 2012 Rank 358 Aligned Residues 84 % Identity 21% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																														.																.	.	.
Query SS confidence																																														.																.	.	.
Query Sequence		L	M	P	W	F	H	G	K	I	T	R	E	Q	A	E	R	L	L	Y	P	P	E	T	G	L	F	L	V	R	E	S	T	N	Y	P	G	D	Y	T	L	C	V	S	C	.	D	G	K	V	E	H	Y	R	I	M	Y	H	A	S	K	.	.	.	L	S	I	D	E	E	V	Y	F	E	N	L	M	Q	L	V	E
Query Conservation																																														.																.	.	.
Alig confidence								.																																						.																.	.	.
Template Conservation								.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V
Template Known Secondary structure		T		T	T	B		.												T	T	S		T	T									S	T	T											T	T																				S	S	S				S	S
Template Predicted Secondary structure								.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	T	S	D	A	D	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	L	Q	N	K	I	R	L
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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