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Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank191Aligned Residues224
% Identity24%Templatec3efwA_
PDB info PDB header:transferase/inhibitorChain: A: PDB Molecule:serine/threonine-protein kinase 6; PDBTitle: structure of auroraa with pyridyl-pyrimidine urea inhibitor
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SGWALNMKELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKNDATAQA. . . . . FLAEASVMTQLRHSNLVQLLGVIVEE
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Template Sequence  RQWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF. HD
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G..GGTTTTT

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   126...130 .........140.........150.........160.........170.........180.........190.........200 ..
 
   259260.........270.........280.........290.........300.........310.........320.........330........
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Query Sequence  KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE
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Template Sequence  ATRVYLILEYAPLGTVYRELQKLSK. . FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFL. . . .
Template Known Secondary structure  SS


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   203......210.........220....... ..230.........240.........250.........260.........270......
 
   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEV
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Template Sequence  . . . . . . . . . . . . DYLPPEMI. . . . . . EKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGARDL
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GGGT......

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   294.....300. ........310........ .320.........330......... 340.........350...
 
   419420.........430........
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Query Sequence  MKNCWHLDAAMRPSFLQLRE
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Template Sequence  ISRLLKHNPSQRPMLREVLE
Template Known Secondary structure  S
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   360.........370.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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