Job Description P41240 Confidence 100.00% Date Thu Apr 26 09:28:47 BST 2012 Rank 166 Aligned Residues 237 % Identity 21% Template c3dlsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pas domain-containing serine/threonine-protein kinase; PDBTitle: crystal structure of human pas kinase bound to adp Resolution 2.30 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.											.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	E	L	K	L	L	Q	T	I	G	K	G	E	F	G	D	V	M	L	G	D	Y	R	.	.	G	N	K	V	A	V	K	C	I	K	N	D	A	T	A	Q	A	.	.	.	.	.	.	.	.	.	.	F	L	A	E	A	S	V	M	T	Q	L	R	H	S	N	L	V	Q	L	L	G	V	I	V	E	E	K
Query Conservation																										.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																		.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																														.
Template Sequence		S	Q	K	Y	S	T	M	S	P	L	G	S	G	A	F	G	F	V	W	T	A	V	D	K	E	K	N	K	E	V	V	V	K	F	I	K	K	E	K	V	L	E	D	C	W	I	E	D	P	K	L	G	K	V	T	L	E	I	A	I	L	S	R	V	E	H	A	N	I	I	K	V	L	D	I	F	.	E	N	Q
Template Known Secondary structure												S	S	S	S	S		S							T	T	T	T										S	T	T	S		T	T	S					T	T	T											T	T				T	T	B								.			S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		996	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.		.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		G	G	L	Y	I	V	T	E	Y	M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	S	V	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V	H	R	D	L	A	A	R	N	V	L	V	S	E	D	N	V	A	K	V	S	D	F	G	L	T	K	.	.
Query Conservation																																																																																.	.
Alig confidence																											.																																																					.	.
Template Conservation																											.
Template Sequence		G	F	F	Q	L	V	M	E	K	H	G	S	G	L	D	L	F	A	F	I	D	R	H	P	R	.	L	D	E	P	L	A	S	Y	I	F	R	Q	L	V	S	A	V	G	Y	L	R	L	K	D	I	I	H	R	D	I	K	D	E	N	I	V	I	A	E	D	F	T	I	K	L	I	D	F	G	S	A	A	Y	L
Template Known Secondary structure		S										T	T	S		B							T				.																							T	T				S			S	G	G	G					T	T	S								T	T
Template Predicted Secondary structure																											.
Template SS confidence
		1075	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.		1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		E	A	S	S	T	Q	D	T	G	K	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	.	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V	V	P	R	V	E	K	G	Y	K	M	D	A	P	D	G	C	P	P	A	V	Y
Query Conservation																											.
Alig confidence																											.																				.											.	.	.	.	.	.	.
Template Conservation																																															.											.	.	.	.	.	.	.
Template Sequence		E	R	G	K	L	F	Y	T	F	C	G	T	I	E	Y	C	A	P	E	V	L	M	G	N	P	Y	R	G	P	E	L	E	M	W	S	L	G	V	T	L	Y	T	L	V	F	.	E	E	N	P	F	C	E	L	E	E	.	.	.	.	.	.	.	T	V	E	A	A	I	H	P	P	Y	L	V	S	K	E	L	M
Template Known Secondary structure			T	T			B		S			S		G	G	G							T	T			B		S																		.	S	S		S		S	S	G	G	G	.	.	.	.	.	.	.	G	T	T	T					S	S
Template Predicted Secondary structure																																															.											.	.	.	.	.	.	.
Template SS confidence
		1154	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.		.	1200	.	.	.	.	.	.	.	.								.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	M	K	N	C	W	H	L	D	A	A	M	R	P	S	F	L	Q	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	V	S	G	L	L	Q	P	V	P	E	R	R	T	T	L	E	K	L	V	T
Template Known Secondary structure								T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1226	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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