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Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank206Aligned Residues218
% Identity24%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210..... ....220.... .....230.........240.........250.........260.....
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Query Sequence  KELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCI. . . . . KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV
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Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDD. FVYVV
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   37..40.........50.........60.........70.........80.........90.........100.........110 .....
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
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Query Sequence  TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT
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Template Sequence  LEICRRRSLLELHKRRKA. . VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . . . .
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   116...120.........130... ......140.........150.........160.........170.........180.......
 
   346...350.........360.........370.........380.........390.........400.........410.........420.....
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Query Sequence  GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHL
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Template Sequence  . . . . . . . . . . . . . . . . . HSFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINPVASALIRRMLHA
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   214.....220.........230.. .......240.........250... ......260.........270....
 
   426...430........
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Query Sequence  DAAMRPSFLQLRE
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Template Sequence  DPTLRPSVAELLT
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   275....280.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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