Job Description P41240 Confidence 100.00% Date Thu Apr 26 09:28:47 BST 2012 Rank 190 Aligned Residues 236 % Identity 15% Template c3byvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rhoptry kinase; PDBTitle: crystal structure of toxoplasma gondii specific rhoptry2 antigen kinase domain Resolution 1.80 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.																											.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	L	L	Q	T	I	G	K	G	E	F	G	D	V	M	L	G	D	Y	R	.	G	N	K	V	A	V	K	C	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	D	A	T	A	Q	A	F	L	A	E	A	S	V	M	T	Q	L	R	H	S	N
Query Conservation																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	R	G	T	V	L	G	Q	E	D	P	Y	A	Y	L	E	A	T	D	E	T	G	E	S	F	E	V	H	V	P	Y	F	T	E	P	P	S	N	A	I	K	Q	M	K	E	E	V	L	R	L	R	L	L	R	G	I	K	N	Q	K	Q	A	K	V	H	L	R	F	I	F	P	F	D	L	V	K	D	P	Q
Template Known Secondary structure												T	T																										T	T											G	G	G	G	S	T	T			S										B				S						T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		L	V	Q	L	L	G	V	I	V	E	E	K	G	G	L	Y	I	V	T	E	Y	M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	S	V	.	.	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V	H	R	D	L	A	A	R	N	V	L	V	S	E	D
Query Conservation																																								.	.
Alig confidence																																								.	.
Template Conservation
Template Sequence		K	K	K	M	I	R	V	M	W	V	L	S	R	F	F	L	Y	P	R	M	Q	S	N	L	Q	T	F	G	E	V	L	L	S	H	S	S	T	H	K	S	L	V	H	H	A	R	L	Q	L	T	L	Q	V	I	R	L	L	A	S	L	H	H	Y	G	L	V	H	T	Y	L	R	P	V	D	I	V	L	D	Q	R
Template Known Secondary structure		S		S									S									S													T	T	T	T	T																									T	T				S				G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.											.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	A	K	V	S	D	F	G	L	T	K	E	A	S	S	T	Q	D	T	G	K	.	.	.	.	.	.	.	.	.	.	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.																																			.													.
Template Conservation																																																																				.													.
Template Sequence		G	G	V	F	L	T	G	F	E	H	L	V	R	D	G	A	R	V	V	S	S	V	S	R	G	F	E	P	P	E	L	E	A	R	R	A	T	I	S	Y	H	R	D	R	R	T	L	M	T	F	S	F	D	A	W	A	L	G	L	V	I	Y	W	I	W	C	.	A	D	L	P	I	G	G	S	E	W	I	F	.
Template Known Secondary structure									G	G	G				T	T									T	T											T	S	T																													.	S	S						S	G	G	G	G	.
Template Predicted Secondary structure																																																																				.													.
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.		500	.	.	.	.	.	.	.	.	.	510	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430										.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.
Query Sequence		V	P	R	V	E	K	G	Y	K	M	D	A	P	D	G	C	P	P	A	V	Y	E	V	M	K	N	C	W	H	L	D	A	A	M	R	.	.	.	.	.	.	.	.	.	P	S	F	L	Q	L	R	E	Q	L	E	H
Query Conservation																																					.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	R	S	C	K	N	I	P	Q	P	V	R	A	L	L	E	G	F	L	R	Y	P	K	E	D	R	L	L	P	L	Q	A	M	E	T	P	E	Y	E	Q	L	R	T	E	L	S	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S	S																T		S	S	G	G	G									T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions