Job Description P41240 Confidence 100.00% Date Thu Apr 26 09:28:47 BST 2012 Rank 244 Aligned Residues 220 % Identity 30% Template c3alnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 4; PDBTitle: crystal structure of human non-phosphorylated mkk4 kinase domain2 complexed with amp-pnp Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.																		.	.	.	.
Query SS confidence																																		.	.																		.	.	.	.
Query Sequence		Y	R	S	G	W	A	L	N	M	K	E	L	K	L	L	Q	T	I	G	K	G	E	F	G	D	V	M	L	G	D	Y	R	.	.	G	N	K	V	A	V	K	C	I	K	N	D	A	T	A	Q	A	.	.	.	.	F	L	A	E	A	S	V	M	T	Q	L	R	H	S	N	L	V	Q	L	L	G	V	I	V	E
Query Conservation																																		.	.																		.	.	.	.
Alig confidence																																		.	.																		.	.	.	.
Template Conservation
Template Sequence		P	E	Q	H	W	D	F	T	A	E	D	L	K	D	L	G	E	I	G	R	G	A	Y	G	S	V	N	K	M	V	H	K	P	S	G	Q	I	M	A	V	K	R	I	R	S	T	V	D	E	K	E	Q	K	Q	L	L	M	D	L	D	V	V	M	R	S	S	D	C	P	Y	I	V	Q	F	Y	G	A	L	F	R
Template Known Secondary structure										T	T	S				.							S	S									T	T	T															S															T		T	T		T	T	B
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																							.	.																															.
Query SS confidence																							.	.																															.
Query Sequence		E	K	G	G	L	Y	I	V	T	E	Y	M	A	K	G	S	L	V	D	Y	L	.	.	R	S	R	G	R	S	V	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	.	N	F	V	H	R	D	L	A	A	R	N	V	L	V	S	E	D	N	V	A	K	V	S	D	F	G
Query Conservation																							.	.																															.
Alig confidence				.																			.	.																															.
Template Conservation				.
Template Sequence		E	G	.	D	C	W	I	C	M	E	L	M	S	T	S	F	D	K	F	Y	K	Y	V	Y	S	V	L	D	D	V	I	P	E	E	I	L	G	K	I	T	L	A	T	V	K	A	L	N	H	L	K	E	N	L	K	I	I	H	R	D	I	K	P	S	N	I	L	L	D	R	S	G	N	I	K	L	C	D	F	G
Template Known Secondary structure		T	T	.										S	B												T	S																									T	T	S								S	G	G	G	B		B		T	T	S				B				S
Template Predicted Secondary structure				.
Template SS confidence
		171	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	K	E	A	S	S	T	Q	D	T	G	K	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V	V	P	R	V	E	K	G	Y	K	M	D	A	P	D	G	C	P	P	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	L	Y	D	V	R	S	D	V	W	S	L	G	I	T	L	Y	E	L	A	T	.	G	R	F	P	Y	P	D	P	P	.	.	.	.	.	.	.	.	.	.	Q	L	S	N	S	E	E	R	E	F	S	P	S
Template Known Secondary structure		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T				T	T																.	S									.	.	.	.	.	.	.	.	.	.					T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.																								.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.											.	.	.	.	.	.	.	290	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	E	V	M	K	N	C	W	H	L	D	A	A	M	R	P	S	F	L	Q	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	N	F	V	N	L	C	L	T	K	D	E	S	K	R	P	K	Y	K	E	L	L	K
Template Known Secondary structure												S	S	T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions