Job Description P41240 Confidence 100.00% Date Thu Apr 26 09:28:47 BST 2012 Rank 189 Aligned Residues 221 % Identity 26% Template c3a60B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase beta-1; PDBTitle: crystal structure of unphosphorylated p70s6k1 (form i) Resolution 2.80 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		A	L	N	M	K	E	L	K	L	L	Q	T	I	G	K	G	E	F	G	D	V	M	L	G	D	Y	.	.	.	.	.	R	G	N	K	V	A	V	K	C	I	K	N	D	A	T	A	Q	A	F	L	A	E	A	S	V	M	T	Q	L	R	H	S	N	L	V	Q	L	L	G	V	I	V	E	E	K	G	G	L	Y
Query Conservation																												.	.	.	.	.
Alig confidence																												.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		K	I	R	P	E	C	F	E	L	L	R	V	L	G	K	G	G	Y	G	K	V	F	Q	V	R	K	V	T	G	A	N	T	G	K	I	F	A	M	K	V	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	H	P	F	I	V	D	L	I	Y	A	F	.	Q	T	G	G	K	L	Y
Template Known Secondary structure					G	G	G											S	S	S									S	S	T	T	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	B								.			S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																		.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	E	Y	M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	S	V	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V	H	R	D	L	A	A	R	N	V	L	V	S	E	D	N	V	A	K	V	S	D	F	G	L	T	K	E	A	S	S	T	Q
Query Conservation
Alig confidence																						.	.																																																									.	.
Template Conservation																						.	.																																																									.	.
Template Sequence		L	I	L	E	Y	L	S	G	G	E	L	F	M	Q	L	E	R	E	G	I	.	.	F	M	E	D	T	A	C	F	Y	L	A	E	I	S	M	A	L	G	H	L	H	Q	K	G	I	I	Y	R	D	L	K	P	E	N	I	M	L	N	H	Q	G	H	V	K	L	T	D	F	G	L	C	K	E	S	C	G	.	.
Template Known Secondary structure								T	T	T	T	S								T		.	.																							T	T				S				G	G	G					T	T					B				T	T							.	.
Template Predicted Secondary structure																						.	.																																																									.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	G	K	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V	V	P	R	V	E	K	G	Y	K	M	D	A	P	D	G	C	P	P	A	V	Y	E	V	M	K	N	C	W
Query Conservation
Alig confidence		.	.	.	.	.																																		.																				.
Template Conservation		.	.	.	.	.																																		.																				.
Template Sequence		.	.	.	.	.	T	I	E	Y	M	A	P	E	I	L	M	R	S	G	H	N	R	A	V	D	W	W	S	L	G	A	L	M	Y	D	M	L	T	.	G	A	P	P	F	T	G	E	N	R	K	K	T	I	D	K	I	L	K	.	C	K	L	N	L	P	P	Y	L	T	Q	E	A	R	D	L	L	K	K	L	L
Template Known Secondary structure		.	.	.	.	.			T	T	S						T	T	T	T	S	S	T																	.	S	S		T	T			S	S											.							S	S	S												S
Template Predicted Secondary structure		.	.	.	.	.																																		.																				.
Template SS confidence
							256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		424	.	.	.	.	.	430	.	.						.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		H	L	D	A	A	M	R	P	S	.	.	.	.	.	F	L	Q	L	R	E
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.
Template Conservation
Template Sequence		K	R	N	A	A	S	R	L	G	A	G	P	G	D	A	G	E	V	Q	A
Template Known Secondary structure			S		T	T	T	S	T	T		S	T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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