Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank108Aligned Residues241
% Identity23%Templatec2x4fA_
PDB info PDB header:transferaseChain: A: PDB Molecule:myosin light chain kinase family member 4; PDBTitle: the crystal structure of the human myosin light chain2 kinase loc340156.
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210..... ....220.........230.. .......240.........250.........260.........270
Predicted Secondary structure 







..





..










Query SS confidence 




















. .
















. .





































Query Sequence  LKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKNDATAQA. . FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA
Query Conservation    
   

 
 

 
      ..   



          ..
  
   
  
 




 
 
        
 

 
   
Alig confidence 




















..
















..






















.













Template Conservation        

 
 

 

 
        



 
             

  
  
 




      .       

 
   
Template Sequence  NSFYTVSKTEILGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF. ESKNDIVLVMEYVD
Template Known Secondary structure  GGT


TTT



STT


TTB

.
SS

T
Template Predicted Secondary structure 



























.







Template SS confidence 















































































   101........110.........120.........130.........140.........150.........160..... ....170.........
 
   271........280.........290.........300.........310.........320..... ....330....... ..340......
Predicted Secondary structure 























..








..







Query SS confidence 






















































. .











. .








Query Sequence  KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED. . NVAKVSDFGLTK. . EASSTQDTG
Query Conservation   
 
   
       
          


 

 


    

 

   


    ..   

 




 ..         
Alig confidence 













.







































..











..








Template Conservation     
          .            
   
  

                           
 
              
Template Sequence  GGELFDRIIDESYN. LTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN
Template Known Secondary structure  T
TGGG.

TT




GGGTTTT


SS


TT
B



Template Predicted Secondary structure 













.








































Template SS confidence 















































































   185....190........ .200.........210.........220.........230.........240.........250.........260...
 
   347..350.........360.........370.........380.........390.........400......... 410.........420...
Predicted Secondary structure 



























...



Query SS confidence 






























































. . .













Query Sequence  KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD. . . GCPPAVYEVMKNCW
Query Conservation         


       
 








 
 

 
 
  

      

   
  
 
   
 ...  
  
  

  
 
Alig confidence 


































.


























...













Template Conservation                       





 

 

 
.
  

           
                     

   
Template Sequence  FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS. GLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLL
Template Known Secondary structure 
SS
TT

TT
B

.SS
TT

SST


S
SGGGTTS
TTS
Template Predicted Secondary structure 




















.




















Template SS confidence 















































































   264.....270.........280.........290........ .300.........310.........320.........330.........340..
 
   424.....430........
Predicted Secondary structure 





Query SS confidence 














Query Sequence  HLDAAMRPSFLQLRE
Query Conservation    

  


   
  
Alig confidence 














Template Conservation    

  


  


 
Template Sequence  IKEKSWRISASEALK
Template Known Secondary structure 
SSGGGS

Template Predicted Secondary structure 






Template SS confidence 














   343......350.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions