256 c2vagA_ Probab=100.00  E-value=3.7e-36  Score=223.76  Aligned_columns=248  Identities=26%

Q ss_pred             CCCHHHEEEEHHCCCCCCCEEEEEEEC---CEEEEEEEECCCCCH-HHHHHHHHHHHHCCCCCEEEEEEE-----EEECC
Q ss_conf             305688565021687898289999998---809999998786437-899999999985499857028773-----98409
Q batch____       189 ALNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDATA-QAFLAEASVMTQLRHSNLVQLLGV-----IVEEK  259 (450)
Q Consensus       189 ei~~~~~~l~~~LG~G~fG~V~~~~~~---~~~VAiK~~~~~~~~-~~f~~E~~~l~~l~HpnIv~l~g~-----~~~~~  259 (450)
                      |+-.+.+++.++||+|+||.||+|+++   |+.||||+++.+... +++++|+.+|++++|+|+++.++.     .....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEECC
Q ss_conf             72999997888885467543025531358876555899999875213552152035760343166533332333001104
Q batch____       260 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  339 (450)
Q Consensus       260 ~~l~iv~E~~~~G~L~~~l~~~~~~~l~~~~~~~~~~qia~gl~ylh~~~~iH~dl~~~nil~~~~~~~kl~DfGls~~~  339 (450)
                      ..++++++++ .++.......................++..++.++|...++|+|+++.|++++.....++.+|+.+...
T Consensus        89 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~  167 (330)
T c2vagA_          89 GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTL  167 (330)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEE
T ss_pred             CEECCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCC
T ss_conf             0000122112-367521112221110136565555544555554311012222345541589857886200034543344


Q ss_pred             CCCCCCE--------------EEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC----
Q ss_conf             6765312--------------4410334389986289975688999999999999388899988798999999981----
Q batch____       340 SSTQDTG--------------KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK----  401 (450)
Q Consensus       340 ~~~~~~~--------------~~~~~~~aPE~~~~~~~s~ksDVwSfGv~l~El~t~G~~Py~~~~~~ei~~~i~~----  401 (450)
                      .......              .....+.+|+......++.++|+|++|+++|++.+ ++.|+...+..+....+..    
T Consensus       168 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~  246 (330)
T c2vagA_         168 INPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGP  246 (330)
T ss_dssp             SCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCS
T ss_pred             CCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             44321000146633267542001210232100000111123542102258731004-88988758968999999851388


Q ss_pred             ---------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             ---------------------------------------9999998568999999999863789678699999999
Q batch____       402 ---------------------------------------GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  438 (450)
Q Consensus       402 ---------------------------------------g~r~~~p~~~p~~l~~li~~C~~~dP~~RPt~~~i~~  438 (450)
                                                             ....+.+..+++++.+||.+||..||++|||+++|++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         247 LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             9988974420121235465665321000111001233310023565458999999999866588111776789967


