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Job DescriptionP41240
Confidence100.00%DateThu Apr 26 09:28:47 BST 2012
Rank84Aligned Residues241
% Identity24%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210..... ....220......... 230.........240.........250.........260........
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Query Sequence  KELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKNDAT. . AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF. EDNTDIYLVMEL
Template Known Secondary structure  TTTTT

TTT
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   26...30.........40.........50.........60.........70.........80.........90.. .......100....
 
   269270.........280.........290.........300.........310.........320.. .......330....... ..340...
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Query Sequence  MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV. . . SEDNVAKVSDFGLTK. . EASSTQ
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Template Sequence  CTGGELFERVVHKRV. . FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM
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SGGGGGTTTSS..

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SGGGSSSSTT




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   105....110......... 120.........130.........140.........150.........160.........170.........180..
 
   344.....350.........360.........370.........380.........390.........400........ .410.........420.
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Query Sequence  DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP. . DGCPPAVYEVMKN
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Template Sequence  RTKVGTPYYVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIRR
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   183......190.........200 .........210......... 220.........230.........240.........250.........260
 
   422.......430........
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Query Sequence  CWHLDAAMRPSFLQLRE
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Template Sequence  LLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

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   262.......270........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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