Job Description P41240 Confidence 100.00% Date Thu Apr 26 09:28:47 BST 2012 Rank 102 Aligned Residues 256 % Identity 20% Template c2pziA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable serine/threonine-protein kinase pkng; PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017 Resolution 2.40 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																														.	.	.																			.	.	.
Query SS confidence																																														.	.	.																			.	.	.
Query Sequence		K	V	M	E	G	T	V	A	A	Q	D	E	F	Y	R	S	G	W	A	L	N	M	K	E	L	K	L	L	Q	T	I	G	K	G	E	F	G	D	V	M	L	G	D	Y	.	.	.	R	G	N	K	V	A	V	K	C	I	K	N	D	A	T	A	Q	A	.	.	.	F	L	A	E	A	S	V	M	T	Q	L	R
Query Conservation																																														.	.	.																			.	.	.
Alig confidence																						.																								.	.	.																			.	.	.
Template Conservation																						.
Template Sequence		C	P	Y	C	G	S	P	Y	S	F	L	P	Q	L	N	P	G	D	I	V	.	A	G	Q	Y	E	V	K	G	C	I	A	H	G	G	L	G	W	I	Y	L	A	L	D	R	N	V	N	G	R	P	V	V	L	K	G	L	V	H	S	G	D	A	E	A	Q	A	M	A	M	A	E	R	Q	F	L	A	E	V	V
Template Known Secondary structure			T	T	T							S		S	S		T	T				.	T	T	T											T	T									G	G	G	T	T								S		S	S														G	G	G	G	G
Template Predicted Secondary structure																						.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		H	S	N	L	V	Q	L	L	G	V	I	V	E	E	K	G	G	.	.	.	.	L	Y	I	V	T	E	Y	M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	S	V	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V	H	R	D	L	A	A	R	N	V
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.
Template Sequence		H	P	S	I	V	Q	I	F	N	F	V	E	H	T	D	R	H	G	D	P	V	G	Y	I	V	M	E	Y	V	G	G	Q	S	L	.	.	.	.	.	.	.	.	K	Q	K	L	P	V	A	E	A	I	A	Y	L	L	E	I	L	P	A	L	S	Y	L	H	S	I	G	L	V	Y	N	D	L	K	P	E	N	I
Template Known Secondary structure			T	T	B												T	T	S																	.	.	.	.	.	.	.	.																										T	T							S	G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	E	D	N	V	A	K	V	S	D	F	G	L	T	K	E	A	S	S	T	Q	D	T	G	K	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V	V	P	R	V	E
Query Conservation
Alig confidence								.													.																							.																			.														.	.	.	.	.
Template Conservation								.													.																							.																			.														.	.	.	.	.
Template Sequence		M	L	T	E	E	Q	.	L	K	L	I	D	L	G	A	V	S	R	I	.	N	S	F	G	Y	L	Y	G	T	P	G	F	Q	A	P	E	I	V	R	T	G	P	.	T	V	A	T	D	I	Y	T	V	G	R	T	L	A	A	L	T	L	.	D	L	P	T	R	N	G	R	Y	V	D	G	L	.	.	.	.	.
Template Known Secondary structure					S	S		.							T	T				T	.	T			S						T	T	T	S		T	T						S	.																		S	.						T	T				S	S		.	.	.	.	.
Template Predicted Secondary structure								.													.																							.																			.														.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		K	G	Y	K	M	D	A	P	D	G	C	P	P	A	V	Y	E	V	M	K	N	C	W	H	L	D	A	A	M	R	.	P	S	F	L	Q	L	R	E	Q	L	E	H	I	K	T	H
Query Conservation																																.
Alig confidence		.	.																													.
Template Conservation		.	.
Template Sequence		.	.	P	E	D	D	P	V	L	K	T	Y	D	S	Y	G	R	L	L	R	R	A	I	D	P	D	P	R	Q	R	F	T	T	A	E	E	M	S	A	Q	L	T	G	V	L	R	E
Template Known Secondary structure		.	.		T	T																		T		S	S	G	G	G	S		S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions