Job Description P41240 Confidence 100.00% Date Thu Apr 26 09:28:47 BST 2012 Rank 25 Aligned Residues 259 % Identity 41% Template c2psqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:fibroblast growth factor receptor 2; PDBTitle: crystal structure of unphosphorylated unactivated wild type2 fgf receptor 2 (fgfr2) kinase domain Resolution 2.40 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.																.	.	.												.
Query SS confidence																																		.	.	.	.	.	.	.	.	.																.	.	.												.
Query Sequence		S	G	W	A	L	N	M	K	E	L	K	L	L	Q	T	I	G	K	G	E	F	G	D	V	M	L	G	D	Y	R	G	N	.	.	.	.	.	.	.	.	.	K	V	A	V	K	C	I	K	N	D	A	T	A	Q	A	.	.	.	F	L	A	E	A	S	V	M	T	Q	L	.	R	H	S	N	L	V	Q	L	L
Query Conservation																																		.	.	.	.	.	.	.	.	.																.	.	.												.
Alig confidence																																		.	.	.	.	.	.	.	.	.																.	.	.												.
Template Conservation
Template Sequence		P	K	W	E	F	P	R	D	K	L	T	L	G	K	P	L	G	E	G	C	F	G	Q	V	V	M	A	E	A	V	G	I	D	K	D	K	P	K	E	A	V	T	V	A	V	K	M	L	K	D	D	A	T	E	K	D	L	S	D	L	V	S	E	M	E	M	M	K	M	I	G	K	H	K	N	I	I	N	L	L
Template Known Secondary structure		T	T	T	B			G	G	G								S			S	S	S									T		S	T	T		T	T												T	T																			S				T	T	B
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		G	V	I	V	E	E	K	G	G	L	Y	I	V	T	E	Y	M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	.	.	.	S	V	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V	H	R	D	L	A	A	R	N	V	L	V	S	E	D	N	V	A	K
Query Conservation																																	.	.	.
Alig confidence					.																												.	.	.
Template Conservation					.
Template Sequence		G	A	C	.	T	Q	D	G	P	L	Y	V	I	V	E	Y	A	S	K	G	N	L	R	E	Y	L	R	A	R	R	P	P	P	E	E	Q	M	T	F	K	D	L	V	S	C	T	Y	Q	L	A	R	G	M	E	Y	L	A	S	Q	K	C	I	H	R	D	L	A	A	R	N	V	L	V	T	E	N	N	V	M	K
Template Known Secondary structure					.		S	S	S	S									T	T		B								T																														T	T				S				G	G	G					T	T
Template Predicted Secondary structure					.
Template SS confidence
		552	.	.		.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
		330	.	.	.	.	.	.	.						.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		V	S	D	F	G	L	T	K	.	.	.	.	.	E	A	S	S	T	Q	D	T	G	K	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V	V	P	R	V	E	K	G	Y	K
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		I	A	D	F	G	L	A	R	D	I	N	N	I	D	Y	Y	K	K	T	T	N	G	R	L	P	V	K	W	M	A	P	E	A	L	F	D	R	V	Y	T	H	Q	S	D	V	W	S	F	G	V	L	M	W	E	I	F	T	L	G	G	S	P	Y	P	G	I	P	V	E	E	L	F	K	L	L	K	E	G	H	R
Template Known Secondary structure						S	S				T	T				T	T		T	T	T	T	T	T	S		G	G	G								T																					T	T	S			S	S	T	T			G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	A	P	D	G	C	P	P	A	V	Y	E	V	M	K	N	C	W	H	L	D	A	A	M	R	P	S	F	L	Q	L	R	E	Q	L	E	H	I	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	K	P	A	N	C	T	N	E	L	Y	M	M	M	R	D	C	W	H	A	V	P	S	Q	R	P	T	F	K	Q	L	V	E	D	L	D	R	I	L	T
Template Known Secondary structure						T	T	S												T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		722	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions