Job Description P41240 Confidence 100.00% Date Thu Apr 26 09:28:47 BST 2012 Rank 173 Aligned Residues 226 % Identity 23% Template c2onlD_ PDB info PDB header:transferase Chain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer Resolution 4.00 Å

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		195	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure													.											.	.																													.															.	.	.
Query SS confidence													.											.	.																													.															.	.	.
Query Sequence		L	K	L	L	Q	T	I	G	K	G	E	.	F	G	D	V	M	L	G	D	Y	R	.	.	G	N	K	V	A	V	K	C	I	K	N	D	A	T	A	Q	A	F	L	A	E	A	S	V	M	T	Q	L	.	R	H	S	N	L	V	Q	L	L	G	V	I	V	E	.	.	.	E	K	G	G	L	Y	I	V	T	E
Query Conservation													.											.	.																													.															.	.	.
Alig confidence													.											.	.													.	.	.														.															.	.	.
Template Conservation																																						.	.	.
Template Sequence		V	K	S	G	L	Q	I	K	K	N	A	I	I	D	D	V	L	Q	I	F	N	K	R	T	Q	E	K	F	A	L	K	M	L	Q	D	C	.	.	.	P	K	A	R	R	E	V	E	L	H	W	R	A	S	Q	C	P	H	I	V	R	I	V	D	V	Y	E	N	L	Y	A	G	R	K	C	L	L	I	V	M	E
Template Known Secondary structure									B		S			S									T	T	T												S	.	.	.												T	T			S	T	T	B												T	T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.
Predicted Secondary structure																																																											.	.	.														.	.
Query SS confidence																																																											.	.	.														.	.
Query Sequence		Y	M	A	K	G	S	L	V	D	Y	L	R	S	R	G	R	S	V	L	G	G	D	C	L	L	K	F	S	L	D	V	C	E	A	M	E	Y	L	E	G	N	N	F	V	H	R	D	L	A	A	R	N	V	L	V	S	E	.	.	.	D	N	V	A	K	V	S	D	F	G	L	T	K	.	.	E	A	S	S	T
Query Conservation																																																											.	.	.														.	.
Alig confidence																																																											.	.	.														.	.
Template Conservation
Template Sequence		C	L	D	G	G	E	L	F	S	R	I	Q	D	R	G	D	Q	A	F	T	E	R	E	A	S	E	I	M	K	S	I	G	E	A	I	Q	Y	L	H	S	I	N	I	A	H	R	D	V	K	P	E	N	L	L	Y	T	S	K	R	P	N	A	I	L	K	L	T	D	F	G	F	A	K	E	T	T	S	H	N	S
Template Known Secondary structure					S									S		S	S				B																					T	T								G	G	G				S	S	S	S	T	T									S	S						S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	T	G	K	L	P	V	K	W	T	A	P	E	A	L	R	E	K	K	F	S	T	K	S	D	V	W	S	F	G	I	L	L	W	E	I	Y	S	F	G	R	V	P	Y	P	R	I	P	L	K	D	V	V	P	R	V	E	K	G	Y	K	M	D	A	P	D	G	C	P	P	A	V	Y	E	V	M	K	N	C
Query Conservation
Alig confidence																																									.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	T	P	C	Y	T	P	Y	Y	V	A	P	E	V	L	G	P	E	K	Y	D	K	S	C	D	M	W	S	L	G	V	I	M	Y	I	L	L	C	.	G	Y	P	P	F	Y	E	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	E	W	S	E	V	S	E	E	V	K	M	L	I	R	N	L
Template Known Secondary structure					S	S			S	S	S							S	S	S																				T	.	S	S							S	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T			S		T	T							T
Template Predicted Secondary structure																																									.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.														.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	L	D	A	A	M	R	P	S	F	L	Q	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	T	E	P	T	Q	R	M	T	I	T	E	F	M
Template Known Secondary structure		T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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