Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence99.55%DateThu Apr 26 09:28:47 BST 2012
Rank437Aligned Residues74
% Identity15%Templatec2ed1A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:130 kda phosphatidylinositol 4,5-biphosphate- PDBTitle: solution structure of the sh3 domain of 130 kda2 phosphatidylinositol 4,5-biphosphate-dependent arf1 gtpase-3 activating protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50. ........60.........70......
Predicted Secondary structure 
































..












Query SS confidence 

















































. .
























Query Sequence  SAIQAAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAK. . NKVGREGIIPANYVQKREGVKAGTK
Query Conservation         
      
          

    

   

       
    ..   
  
 

 
 
           
Alig confidence 






































.









..
























Template Conservation   


          

 

      


   

 
 

 .     

 
      
  
 

  

  
    
 

Template Sequence  GSSGSSGNKVRRVKTIYDCQADNDDELTFIEGEVIIVTG. EEDQEWWIGHIEGQPERKGVFPVSFVHILSDSGPSSG
Template Known Secondary structure 

S

SS


SS



SSSSB



SS
SS.

SSSTT
TT
GGG





S

Template Predicted Secondary structure 























.



















Template SS confidence 












































































   1........10.........20.........30......... 40.........50.........60.........70......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions