Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence99.54%DateThu Apr 26 09:28:47 BST 2012
Rank447Aligned Residues62
% Identity26%Templatec2dx1A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crystal structure of rhogef protein asef
Resolution2.36 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70...
Predicted Secondary structure 


































Query SS confidence 































































Query Sequence  SGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKA
Query Conservation        
          

    

   

       
       
  
 

 
 
        
Alig confidence 






























.









.




















Template Conservation        
         


 
  
  
 
  .     

 
 .     



  

        
Template Sequence  SVVCAEALWDHVTXDDQELGFKAGDVIEVXD. ATNREWWWGR. VADGEGWFPASFVRLRVNQDA
Template Known Secondary structure 

SS
B



TTB

B
TT
.

SSS.
SS
GGG
S



Template Predicted Secondary structure 

















.




.















Template SS confidence 































































   124.....130.........140.........150.... .....160.... .....170.........180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions