Return to main results Retrieve Phyre Job Id

Job DescriptionP41240
Confidence99.68%DateThu Apr 26 09:28:47 BST 2012
Rank367Aligned Residues68
% Identity28%Templatec2ct4A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: solution strutcure of the sh3 domain of the cdc42-2 interacting protein 4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70...
Predicted Secondary structure 






































Query SS confidence 



































































Query Sequence  AAWPSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKA
Query Conservation     
      
          

    

   

       
       
  
 

 
 
        
Alig confidence 



































































Template Conservation 
         


 
 
    


   

 
 
        
       
  
 

  

       
Template Sequence  SSGSSGGHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTSGPSS
Template Known Secondary structure 



SS
SS
B


STT


B
TT


SSS

SSS
GGG



S
Template Predicted Secondary structure 



































Template SS confidence 



































































   2.......10.........20.........30.........40.........50.........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions