Job Description P41240 Confidence 99.64% Date Thu Apr 26 09:28:47 BST 2012 Rank 371 Aligned Residues 76 % Identity 22% Template c2csqA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.									.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		Q	A	A	W	P	S	G	T	E	C	I	A	K	Y	N	F	H	G	T	A	.	.	.	.	.	.	.	.	E	Q	D	L	P	F	C	K	G	D	V	L	T	I	V	A	V	T	K	D	P	N	W	Y	K	A	K	N	K	V	G	R	E	G	I	I	P	A	N	Y	V	Q	K	R	E	G	V	K	A	G	T	K
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																												.
Template Conservation																																																									.
Template Sequence		G	A	E	E	L	P	A	R	I	F	V	A	L	F	D	Y	D	P	L	T	M	S	P	N	P	D	A	A	E	E	E	L	P	F	K	E	G	Q	I	I	K	V	Y	G	D	K	D	A	D	G	F	Y	R	G	E	.	T	C	A	R	L	G	L	I	P	C	N	M	V	S	E	I	Q	A	D	D	E	E	M	M
Template Known Secondary structure			S											S	S		B		T	T	T	T	S	S						T	T	B			B		T	T											T	T							.		T	T							T	T	T	S							S
Template Predicted Secondary structure																																																									.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		77	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	S	G	P
Template Known Secondary structure			S			S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions